Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1762 ATGCAGGTCGTTCTCTGGTGGAAGAAGATGGAACGTATTTTGAGCTTCATCTACTTGGTGGTGTCTCTCAATCTCATGCTCTGCCAACCAAATGCAGCAGAACCTATCTCAGACAAGCGAGCATTGCTTGACTTTGTGGAAAAGTTGTCTCCCTCAAGATCACTGAATTGGAACGCAACATCTTCTCCATGTACCTCCTGGACCGGTGTAACCTGTAACGGAGACAAGTCACGAGTTATAGCCATTCACTTGCCAGGTTTCGGCTTTCACGGAACCATTCCCCCCAACACAATAAGCCGCGTCACGGGCTTGCAAACACTCTGCCTCAGATCCAACAATTTCACGGGTCCCTTACCGGACTTCTCTGCTTGGAGGAACCTCTCTGTTCTCAACTTGTCCAACAATTACTTCACTGGCTCCATTCCTCTCTCGCTCTCCAACTTGACTCACCTAACTTCCATGAATCTCGCTAACAATTCTCTTTCTGGGGAAATCCCCGTCTCTCTTCAGAGGTTTCCCAACTCAGCATTCCTTGGAAACAATGTCTCTCTTCAAACCTCTCCCGCAGCTCCATTTTCTAAATCTGCCAAACACGGCCTTATTGTTGCCGCTGCTCTTATTGGTCTGGCATCATTGGTTGCTTTTATCTTTGTATGCTGGTCGAGAAAGAAGAAGAATGGGGATTCATTTGCTCGGAAGTTGCAGAAGGGAGATATGTCTCCGGAGAAAGTAGTGTGGAGGGACCTGGATGCAAATAATAAGATTGTATTCTTTGATGGGTGTAGTTATGCGTTTGACTTGGAGGATTTGCTTAGGGCTTCTGCAGAGGTGCTGGGGAAGGGGACGTTTGGTGCTGCATATAAGGCTGCGCTGGAGGATGCTACCACTGTTGTTGTCAAGAGGTTGAAGGAGGTGGCTGTTGGAAAGAGGGACTTTGAACAACTCATGGACCTTGTTGGGGATCTTAAACATGACAATGTTGTTCAGCTCAAGGGCTATTACTATTCCAAAGATGAGAAACTCATGGTCTATGATTACTACACTCAGGGGAGTCTCTCTGCTTTGTTGCATGGTAAAAGAGGAGAGGATAGAGTGGGTTTGGATTGGGATACTAGGATGAAAATTGCATTGGGTGCTGCACGAGGTCTTGCTCGTATCCATTGCGAGAATGGTGGGAAACTTGTACATGGAAATATCAGATCCTCAAATATCTTTCTGAATAGTAAACAGTATGGTTGTGTATCTGATCTCGGGCTGGCAACCATAATGAGTTCAGTTGCCATACCGATTTCACGAGCTGCTGGTTACAGAGCACCTGAAGTTACAGACACGAGGAAAGCGACACAAGCTTGTGATGTTTACAGCTTTGGTGTGGTGTTACTGGAGCTTCTCACTGGGAAATCCCCTGTCTACACCACTGGTGGCGATGAGATTGTGCACTTGGTTAGATGGGTTCATTCGGTTGTGAGAGAGGAGTGGACGGCTGAAGTGTTTGACTTAGAGCTTATCAGATATCCCAACATAGAGGAAGAGATGGTGGAAATGTTGCAGATAGCCATGTCATGTGTGGTGAGGGTTCCTGATGAGAGGCCTAAGATGTTAGAACTTGTCAAAATGATAGAAAATGTAAGGCCGATTGATATTGATATTGATATAGTAGTGAATCAGCCATCTGAGAACCAAGTGGAAACCTCAACTGCAACACAGACCCCTTTAACAACTTAA 1725 0.4591 MQVVLWWKKMERILSFIYLVVSLNLMLCQPNAAEPISDKRALLDFVEKLSPSRSLNWNATSSPCTSWTGVTCNGDKSRVIAIHLPGFGFHGTIPPNTISRVTGLQTLCLRSNNFTGPLPDFSAWRNLSVLNLSNNYFTGSIPLSLSNLTHLTSMNLANNSLSGEIPVSLQRFPNSAFLGNNVSLQTSPAAPFSKSAKHGLIVAAALIGLASLVAFIFVCWSRKKKNGDSFARKLQKGDMSPEKVVWRDLDANNKIVFFDGCSYAFDLEDLLRASAEVLGKGTFGAAYKAALEDATTVVVKRLKEVAVGKRDFEQLMDLVGDLKHDNVVQLKGYYYSKDEKLMVYDYYTQGSLSALLHGKRGEDRVGLDWDTRMKIALGAARGLARIHCENGGKLVHGNIRSSNIFLNSKQYGCVSDLGLATIMSSVAIPISRAAGYRAPEVTDTRKATQACDVYSFGVVLLELLTGKSPVYTTGGDEIVHLVRWVHSVVREEWTAEVFDLELIRYPNIEEEMVEMLQIAMSCVVRVPDERPKMLELVKMIENVRPIDIDIDIVVNQPSENQVETSTATQTPLTT 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1762 574 Pfam Leucine rich repeat N-terminal domain 37 73 IPR013210 -
Aed11g1762 574 SMART serkin_6 272 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1762 574 PANTHER PROTEIN, PUTATIVE-RELATED 32 546 - -
Aed11g1762 574 SUPERFAMILY Protein kinase-like (PK-like) 276 540 IPR011009 -
Aed11g1762 574 Pfam Leucine Rich Repeat 126 148 IPR001611 GO:0005515
Aed11g1762 574 ProSiteProfiles Protein kinase domain profile. 272 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1762 574 ProSitePatterns Protein kinases ATP-binding region signature. 278 309 IPR017441 GO:0005524
Aed11g1762 574 PANTHER OS05G0588300 PROTEIN 32 546 - -
Aed11g1762 574 Gene3D Phosphorylase Kinase; domain 1 243 346 - -
Aed11g1762 574 Gene3D Transferase(Phosphotransferase) domain 1 348 555 - -
Aed11g1762 574 Pfam Protein kinase domain 275 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1762 574 SUPERFAMILY L domain-like 42 174 - -
Aed11g1762 574 Gene3D Ribonuclease Inhibitor 36 198 IPR032675 -
Aed11g1762 574 ProSiteProfiles Leucine-rich repeat profile. 126 149 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1762 Aed-Chr11 21083873 21086467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1762 33 569 Receptor kinase-like Gene Family AT4G23740 57.861 0.0 673
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed11g1762 Pkinase 2.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1762 - - gmx:100783234 953.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1762 11 21083873 21086467 Aed11g1762 11 21083873 21086467 ECH
Aed11g1762 11 21083873 21086467 Aed5g2341 5 25050414 25054377 PCT