Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1752 ATGGGGAACTGTAACAGCGAAGCATCTTACCAAACCCACTCTGAAGCCTCCAACGTCAACGGCATCAGCGTCCTCCCTCCCAATTCGGAGCCCTCCATGGGCCGGGTCCTGGGCCGGCCCATGAAGGATGTCCGGTCCAGCTACACCTTCGGGCGCGAGCTGGGCCGCGGTCAATTCGGTGTGACGTACCTAGTGACCGAGAAACACACACACACGAGACAAGAGTTGGCGTGCAAATCCATTGCCACGCGGAAACTCGTCCACCGCGATGACTTGGAGGACATCCGGCGCGAGGTGCAGATCATGCACCACCTCACCGGCCACCGCAACATCGTGGAGCTCAAGGGTGCTTACGAGGACCGCCACTCCGTTAACCTCATCATGGAGCTCTGCGGCGGCGGCGAGCTCTTCGACCGGATCATCGCCAAGGGCCACTACTCTGAGCGTGCCGCCGCCGACCTCTGCCGCCAGATCGTGACGGTGGTCCACGATTGCCACACTATGGGAGTGATGCACAGAGATCTCAAGCCGGAGAACTTCCTCTTCCTCAGCAAGGACGAGAACTCGCTGCTTAAGGCCACGGACTTCGGTCTCTCCGTGTTCTTCAAGCCTGGTGATGTTTTTAAGGATATTGTTGGGAGTGCGTACTATGTTGCTCCTGAGGTGCTGCGTCGAAGTTATGGACCCGAAGTTGATATTTGGAGTGCCGGGGTTATATTGTTCATTCTGCTCTCTGGTGTCCCTCCCTTTTGGGCAGAAAAGGAAAAGGGTATCTTTGATGCTATTCTTCGTAGCCATATTGATTTTGCATCAGATCCCTGGCCTTCCATATCGAGTAGTGCCAAAGATCTGGTCAAGAACATGTTACGGCCTGACCCCAAACAAAGGCTCTCAGCCGTTGAAGTCCTTAATCATCCTTGGATGAGAGAAGATGGAGCATCTGATAAGCCCCTAGATGTTACTGTTTTATCCAGAATGAAACAATTCAGAGCAATGAACAAGCTAAAGAAAGTAGCTTTGAAGGTCATTGCTGAAAACCTTTCTGAAGAAGAAATCATTGGCTTGAAGGAAATGTTTAAATCCATGGACACAGATAACAGTGGAACAATCACTTTTGAAGAGTTGAAAGCCGGTCTGCCAAAACTCGGCACTAAGGTTTCTGAGTCTGAAGTAAGGCAGTTGATGGAAGCGGCTGATGTAGACGGAAATGGGAGCATTGATTACATTGAATTTATAACAGCTACCATGCACATGAATAGAATGGAAAGAGAGGACCACCTATACAAAGCTTTTGAATATTTTGACAAGGATAGAAGCGGGTACATCACAAAGGAAGAGTTGGAGTCTGCCCTTAAAAAATATAATATGGGTGATGGGAAAACAATAAAGGAAATCATTGCGGAAGTGGATACAGACAATGATGGAAGAATTAACTATGAGGAGTTTGTAGCCATGATGAGGAAAGGCAATCCAGATTTAGTAACCAACAGACGTCGCAAATAA 1503 0.4917 MGNCNSEASYQTHSEASNVNGISVLPPNSEPSMGRVLGRPMKDVRSSYTFGRELGRGQFGVTYLVTEKHTHTRQELACKSIATRKLVHRDDLEDIRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMELCGGGELFDRIIAKGHYSERAAADLCRQIVTVVHDCHTMGVMHRDLKPENFLFLSKDENSLLKATDFGLSVFFKPGDVFKDIVGSAYYVAPEVLRRSYGPEVDIWSAGVILFILLSGVPPFWAEKEKGIFDAILRSHIDFASDPWPSISSSAKDLVKNMLRPDPKQRLSAVEVLNHPWMREDGASDKPLDVTVLSRMKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGTKVSESEVRQLMEAADVDGNGSIDYIEFITATMHMNRMEREDHLYKAFEYFDKDRSGYITKEELESALKKYNMGDGKTIKEIIAEVDTDNDGRINYEEFVAMMRKGNPDLVTNRRRK 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1752 500 Gene3D - 327 416 - -
Aed11g1752 500 Pfam Protein kinase domain 48 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1752 500 ProSitePatterns EF-hand calcium-binding domain. 363 375 IPR018247 -
Aed11g1752 500 ProSiteProfiles EF-hand calcium-binding domain profile. 460 492 IPR002048 GO:0005509
Aed11g1752 500 ProSiteProfiles EF-hand calcium-binding domain profile. 422 457 IPR002048 GO:0005509
Aed11g1752 500 MobiDBLite consensus disorder prediction 1 27 - -
Aed11g1752 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Aed11g1752 500 PANTHER SERINE/THREONINE-PROTEIN KINASE 25 492 - -
Aed11g1752 500 SMART serkin_6 48 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1752 500 ProSitePatterns EF-hand calcium-binding domain. 399 411 IPR018247 -
Aed11g1752 500 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 15 25 492 - -
Aed11g1752 500 ProSiteProfiles EF-hand calcium-binding domain profile. 350 385 IPR002048 GO:0005509
Aed11g1752 500 MobiDBLite consensus disorder prediction 1 38 - -
Aed11g1752 500 Pfam EF-hand domain pair 355 415 IPR002048 GO:0005509
Aed11g1752 500 Pfam EF-hand domain pair 425 487 IPR002048 GO:0005509
Aed11g1752 500 ProSitePatterns EF-hand calcium-binding domain. 470 482 IPR018247 -
Aed11g1752 500 CDD STKc_CAMK 48 307 - -
Aed11g1752 500 SUPERFAMILY EF-hand 346 487 IPR011992 -
Aed11g1752 500 SUPERFAMILY Protein kinase-like (PK-like) 45 320 IPR011009 -
Aed11g1752 500 ProSitePatterns EF-hand calcium-binding domain. 435 447 IPR018247 -
Aed11g1752 500 Gene3D - 333 486 - -
Aed11g1752 500 Gene3D Phosphorylase Kinase; domain 1 50 135 - -
Aed11g1752 500 ProSiteProfiles Protein kinase domain profile. 48 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1752 500 ProSitePatterns Protein kinases ATP-binding region signature. 54 79 IPR017441 GO:0005524
Aed11g1752 500 ProSiteProfiles EF-hand calcium-binding domain profile. 386 421 IPR002048 GO:0005509
Aed11g1752 500 Gene3D Transferase(Phosphotransferase) domain 1 136 326 - -
Aed11g1752 500 SMART efh_1 426 454 IPR002048 GO:0005509
Aed11g1752 500 SMART efh_1 354 382 IPR002048 GO:0005509
Aed11g1752 500 SMART efh_1 390 418 IPR002048 GO:0005509
Aed11g1752 500 SMART efh_1 461 489 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1752 Aed-Chr11 21031466 21035296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1752 34 499 EF-hand Containing Proteins AT4G23650 80.728 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aed11g1752 Pkinase 2.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1752 K13412 - gmx:100808536 924.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1752 11 21031466 21035296 Aed5g2332 5 24991325 24995729 PCT