Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1751 ATGGAACAGAGAAACGTATTGTTATCAGCGTTGAGTGTCGGGGTGGGTCTAGGAGTGGGAATGGGTTTGGCTGGAAAAGGAAAATGGGGTGCTAATGAAAATTCATCCTCAAACGGCGTTACTCCTGAGAACATGGAGCGCGAAATGCTACGACTTATTATCGATGGCAGAGAAAGCAAGGTCACTTTTGATCAATTCCCTTATTATCTTAGAGAGCAGACACGGGTATTGCTAACAAGTGCTGCGTATGTGCATTTGAAGCATGCGGATGTTTCAAGGTATACACGGAATCTTGCTCCTGCAAGCCGGACTATTCTGCTTTCAGGGCCAGCAGAACTTTACCAACAAGTGCTTGCCAAGGCTTTAGCTCACTACTTTGAGTCAAAGTTGCTTCTGTTAGATTTAACTGACTTTTCATTGAAGATTCAGAGTAGATATGGTTCTGCCACCAAAGAATCTCCTTTCAAAAGGTCTACCTCGGAGACAACTTTGGAGCGGCTATCTGACCTGTTTGGCTCATTTTCAATCTTTCCACCACTGAGGGAAGAGCCTAAAGGGAATTTCCACAGGCAACGCAGTGGAGTGGACCTCCGTTCAATGGAGGCTGAAAGATCTAGTAATACTCCTAAGATGCGTAGGAATGCCTCTGCTTCTGCAAATATGAATAGCCTTCCTTTGCAAACCAATCCTACAAATTCAGCTCCTCAGAAGCACATAAGCAACTGGAATTTTGATGAAAGGCTTCTCATACATACTCTGTACAAGGTTCTAGTTTATGTGTCAAAAACCTATCCCATTGTTCTATACTTGCGGGATGTTGACAAATTGTTGGACAGATCACAAAGGATATATAACCTATTCCAGAAAATGCTGAATAAATTAAATGGGCCAATTTTGATTCTTGGTTCACGAGTTCTGGAATCTGGTAGTAACTACAAAGAAGTGGATGACAGACTTGGTTCCCTCTTCCCCTACAACATAGAAATCAGCCCCCCAGAAGATGAAACTTGTCTTGTGAGCTGGAAGTCTCAATTTGAAGAGGACATGAAGATGATACAGATTCAGGATAACAAGAACCATATCATGGAAGTGCTAGCCTTCAATGATCTTGATTGTGATGACCTGGACTCCATCTGTGTATCAGATACAATGGTTCTCAGTAACTATATAGAAGAGATTCTCGTGTCAGCAATTTCTAGTCATTTAATGAATACCAAAGATCCTGAATACAGAAATGGCAAATTGGTTATTCCATGCAATAGTTTGTCCCATGCATTGGGTATATTCCAGGAGGCGAAATTCTGTGCAAGAGATATATTAAAATTAGAAGCCCAAGCAGTGACGTCTGAGCCGGGAGAAGATGGAGCTGTTGTGAAGCCAACAGAAAAAAAAGCAGAAAATCCTGCTCTTGATATAAAGGCTGAAGCAGCAACAGATACATCAACTTCAACTTCAACTTCAATGGGAAAAACTGATGGTGAAAATGCAGTTCCTGCACCCAAAGTTGAAGTTCCCCCTGATAATGAGTTTGAGAAGCGAATAAGGCCTGAGGTAATACCCGCAAACGAGATAGGTGTAAAATTCTCAGATGTTGGTGCCTTAGACGAGACAAAAGAGTCGCTTCAAGAACTAGTTATGCTTCCGCTTCGAAGGCCAGACCTTTTCCGAGGAGGCCTTTTAAAGCCTTGTAAAGGAATATTGCTATTTGGGCCTCCTGGGACAGGGAAGACAATGCTGGCAAAGGCCATTGCGAGTGAAGCCGGCGCGAGTTTCATCAATGTATCCATGTCTACCGTCACCTCTAAATGGTTTGGTGAAGATGAGAAGAATGTTCGTGCTTTATTCACACTCGCCGCCAAGGTCTCCCCGACTATTATTTTTGTTGATGAGGTTGACAGCATGCTGGGACAGAGGACCAGAGTTGGAGAGCATGAAGCCATGAGGAAAATTAAGAATGAGTTTATGACTCATTGGGATGGACTTATGACCAGTCCTGGGGAGCGCATCCTTGTTCTTGCTGCAACCAATAGGCCTTTTGACCTCGATGAAGCAATTATTAGGAGATTTGAAAGGAGAATTATGGTTGGGATGCCATCTGTGGAGAACAGGGAAAAGATTTTGAGGACTCTTTTGGCAAAAGAGAAGGTGGATGAGAAACTTGAGTTTAAGGAAGTTGCAGTTATGACAGAAGGATATAGCGGAAGTGATCTCAAGAACTTGTGCACAACTGCTGCTTACAGACCTGTTAGAGAGTTAATTAAGCAAGAGAGACTAAAGACTCTGGAGAAAAAGAAGAAGGATGCTGCTGGAGAATCTGCGGATACAGAAGAGGAAGGTAAACAAGAAAGAGTTATTACCCTTAGACCTTTGAGCATGCAGGACTTCAAAGAGGCTAAGAATCAGGTTTCCGCAAGCTACGCGGCTGAAGGAGCTGGAATGAATGAGTTAAAGCAGTGGAATGAGTTGTATGGGGAAGGCGGTACAAGGAAGCAACAACAGTTATCTTATTTCCTATGA 2517 0.4299 MEQRNVLLSALSVGVGLGVGMGLAGKGKWGANENSSSNGVTPENMEREMLRLIIDGRESKVTFDQFPYYLREQTRVLLTSAAYVHLKHADVSRYTRNLAPASRTILLSGPAELYQQVLAKALAHYFESKLLLLDLTDFSLKIQSRYGSATKESPFKRSTSETTLERLSDLFGSFSIFPPLREEPKGNFHRQRSGVDLRSMEAERSSNTPKMRRNASASANMNSLPLQTNPTNSAPQKHISNWNFDERLLIHTLYKVLVYVSKTYPIVLYLRDVDKLLDRSQRIYNLFQKMLNKLNGPILILGSRVLESGSNYKEVDDRLGSLFPYNIEISPPEDETCLVSWKSQFEEDMKMIQIQDNKNHIMEVLAFNDLDCDDLDSICVSDTMVLSNYIEEILVSAISSHLMNTKDPEYRNGKLVIPCNSLSHALGIFQEAKFCARDILKLEAQAVTSEPGEDGAVVKPTEKKAENPALDIKAEAATDTSTSTSTSMGKTDGENAVPAPKVEVPPDNEFEKRIRPEVIPANEIGVKFSDVGALDETKESLQELVMLPLRRPDLFRGGLLKPCKGILLFGPPGTGKTMLAKAIASEAGASFINVSMSTVTSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLMTSPGERILVLAATNRPFDLDEAIIRRFERRIMVGMPSVENREKILRTLLAKEKVDEKLEFKEVAVMTEGYSGSDLKNLCTTAAYRPVRELIKQERLKTLEKKKKDAAGESADTEEEGKQERVITLRPLSMQDFKEAKNQVSASYAAEGAGMNELKQWNELYGEGGTRKQQQLSYFL 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1751 838 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 838 - -
Aed11g1751 838 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 838 - -
Aed11g1751 838 Pfam AAA+ lid domain 721 761 IPR041569 -
Aed11g1751 838 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 526 769 IPR027417 -
Aed11g1751 838 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 364 IPR027417 -
Aed11g1751 838 CDD AAA 564 696 - -
Aed11g1751 838 Gene3D - 698 800 - -
Aed11g1751 838 MobiDBLite consensus disorder prediction 186 214 - -
Aed11g1751 838 Pfam ATPase family associated with various cellular activities (AAA) 566 696 IPR003959 GO:0005524|GO:0016887
Aed11g1751 838 Gene3D - 525 809 IPR027417 -
Aed11g1751 838 SMART AAA_5 562 699 IPR003593 -
Aed11g1751 838 MobiDBLite consensus disorder prediction 763 782 - -
Aed11g1751 838 MobiDBLite consensus disorder prediction 474 506 - -
Aed11g1751 838 MobiDBLite consensus disorder prediction 476 492 - -
Aed11g1751 838 Coils Coil 758 778 - -
Aed11g1751 838 ProSitePatterns AAA-protein family signature. 669 688 IPR003960 GO:0005524|GO:0016887
Aed11g1751 838 MobiDBLite consensus disorder prediction 186 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1751 Aed-Chr11 21024898 21030499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1751 526 758 Calmodulin-binding Proteins AT3G56690 38.559 2.65e-42 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1751 - - gmx:100808011 1396.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1751 11 21024898 21030499 Aed11g1751 11 21024898 21030499 ECH