Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1735 ATGGGTAGCAAAGGCAAAGAGCAAGAATCAATAACAAGGGTTATGACTCACGGAGGTCGATACGTGCAATACAACGTTTACGGAAACATGTTCGAGGTTCCCTCCAAGTATGTCCCTCCGATTCGCCCTATCGGTAGAGGCGCATACGGCATCGTTTGCGCTGCTGTTAACAGCGATACGCACGAGGAAGTTGCCATAAAGAAGATTGGTAACACATTTGACAACATCATTGACGCTAGACGGACTTTGAGGGAAATCAAGCTCCTTCGCCACATGGACCATGAAAATATTATTGCTATTAGGGATATCATACGACCTCCCAAAAAGGATGCCTTCAATGATGTTTACATTGTTTATGAATTGATGGACACTGATCTTCATCAGATTATTCGTTCTGACCAACCTCTTAACGATGACCACTGTCAGTACACCTCGGCTATTGATGTTTGGTCTGTTGGTTGCATATTTGCTGAAATTATGACCAGAGAACCCCTGTTTCCTGGGAAAGATTATGTTCATCAACTAAGACTTATAACAGAGTTAATAGGTTCACCCGATGATGCCAGCCTTGGATTTCTCCGAAGTGAAAATGCAAAAAGATATGTTCGACAAATTCCACAATTTAGGAAGCAAAGTTTCTCCGCTAGATTCCCAAATATGTCTCCTGAGGCATTGGATTTGCTAGAAAAGATGCTTGTCTTTGATCCCAACAAACGCATTACTGTTGATGAAGCACTATGTCATCCATATCTTTCATCACTTCATGACATCAATGATGAACCAGTTGGTCCTGGGCACTTCAATTTTGATTTTGAGCAGCCAACATTCACCGAAGAGCACATCAAGGAGCTCATCTGGAGGGAAGCAGTGAGTTACAATCCAGAGCTACCCAGTCACTAA 900 0.4267 MGSKGKEQESITRVMTHGGRYVQYNVYGNMFEVPSKYVPPIRPIGRGAYGIVCAAVNSDTHEEVAIKKIGNTFDNIIDARRTLREIKLLRHMDHENIIAIRDIIRPPKKDAFNDVYIVYELMDTDLHQIIRSDQPLNDDHCQYTSAIDVWSVGCIFAEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSENAKRYVRQIPQFRKQSFSARFPNMSPEALDLLEKMLVFDPNKRITVDEALCHPYLSSLHDINDEPVGPGHFNFDFEQPTFTEEHIKELIWREAVSYNPELPSH 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1735 299 Gene3D Phosphorylase Kinase; domain 1 21 121 - -
Aed11g1735 299 ProSitePatterns Protein kinases ATP-binding region signature. 44 68 IPR017441 GO:0005524
Aed11g1735 299 Gene3D Transferase(Phosphotransferase) domain 1 143 265 - -
Aed11g1735 299 Pfam Protein kinase domain 140 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1735 299 ProSiteProfiles Protein kinase domain profile. 1 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1735 299 Gene3D Phosphorylase Kinase; domain 1 266 289 - -
Aed11g1735 299 SUPERFAMILY Protein kinase-like (PK-like) 41 259 IPR011009 -
Aed11g1735 299 Pfam Protein tyrosine and serine/threonine kinase 42 133 IPR001245 GO:0004672|GO:0006468
Aed11g1735 299 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 14 142 - -
Aed11g1735 299 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 143 297 - -
Aed11g1735 299 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 14 142 - -
Aed11g1735 299 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 143 297 - -
Aed11g1735 299 Gene3D Transferase(Phosphotransferase) domain 1 122 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1735 Aed-Chr11 20926616 20929305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1735 142 295 MAP Kinase Gene Family AT4G01370 77.922 4.10e-87 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Aed11g1735 Pkinase 2.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1735 K20600 - zju:107432958 411.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1735 11 20926616 20929305 Aed5g2310 5 24832317 24836652 PCT