Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1730 ATGGCTCGACAAGTGTGTGAAGACAAAGCATCATCTGGATTCGGCTACTCCGATGTATCATCGGGAAATCCAAATCCAACGATGCTGGTGAACCAGATCCAAGGCTTTGTGTCAGACCCGGAGATGTACAACCTCACCACAGGCATGGAAATGATAGGGTTTCCAAAGACTGACACCAACGCTGTCATGTGGAGGAGTTTCATTCCCAAACCGGGTCCTTCCTCTTCCAAAACCATCCACGACTCTTCCACCACTTTCTACCACCACGACTACAACAACAACAAGCATGCAGATTTCACACCAGGGAATATTTCTGAAACAAGTGCCGAGAATCTAATCGTGGGAACTCACCACGATTCAGCCCCGTGGCAAGACAACAACAACAGCAACAGGTTTGATGATTCTTCTCTAAGGTGTGTGTTCCCTTGTGAAGCCAACGAAAGGCCTAGTCAAGGTCTTTCACTCTCTCTTAGTTCAACAAACCCTTCCACTATCGGGTTGCAATCTTTTGAGCTAAGACAGACAGGCCATAATCCTGATTTTGTTTCGTCGAGTTCCAGAGATGGGTTCTTTGGAAAACCAGTTTCTGTTCAACAGCAACAACAACAGATGCTACAGGATGGGTATGTGAGTTCCAATTCTAAAGCGGCAAGTGTCTATCAACAAGGACATTTCCTGGTGAAGAACTCCAAGTACTTGATGCCTGCACAGGACCTTCTGAACGAGTTTTGTAGCCTAGGCGCAAAGCAAAGCGAGGTGGGAAAGCCAAAATCATGGTTGAAGAAGCAGCAGTGGGAAGATCAGGAAAATAACGTTAACGGTATCGGTTCCTCGAAGAAGCATTCTCTGACCTCACTAGAGTTGGTGGAGTTGCAGAAGAGAAAGACAAAGCTGCTTTCGATGCTGGAAGAGGTTGACAGAAGGTACAAACACTACCGAAATCAGATGAAGAGCGTGGTGTCGTCGTTTGAAGCAGTGGCGGGGAATGGTGCTGCGACGGTGTACTCAGCTTTGGCGTTGAAAGCGATGTCGAGACATTTCAGGTGTTTGAAGGATGGGATATTGACGCAGATAGAAGCAACAAGAAAAGGAATGGGAGAGAAAGATCCGGTTGCACCGGGCACAACAAGGGGCGAAACGCCAAGGCTAAAAGTGATTGACCAAGCACTCAGACAACAAAGGGCGTTTCAGCAAATGAGCATGATGGAAACACATCCTTGGAGACCCCAACGTGGCCTTCCTGAGCGAGCCGTTTCAGTTCTTCGGGCTTGGCTCTTTGAGCATTTTCTCCACCCGTACCCAAGCGATGTTTCGAATTGGTTTATTAATGCAAGGGTGAGACTATGGAAGCCAATGGTTGAGGAAATGTACTTGGAGGAAGTGAAGGATCCATCTGAAAACAATGGCATAGGTTCCTCAGAAGTAGGGGCAGAGAATATTGAGAATGTTGAAAACCCTCCATCACGATCAGAGGCGGATCAGAAGCCATCAGTGATGAACAACCATAGTAGCCCAGATAACAATAAAAAGGGCCAAGAACAATGCTTTGGGTCGGTGGAGCTCGATTTTTCATCTTACACACACCACTCCTCAGGCCCGGGTATGGTTTCTTACGGAAGTAATGATCATAATGGGAATAACAGCCTGCAGAGTGGGGTGTCGTTGACGTTAGGGTTACAGCAGCATGGGGTGAGCCTAGCTTTCCCGTCAGCAACACAGAGTTCACTGTACTACCACCACTCAAGGGATCAAATGGAAGATTGTCAACCAATTCAGTACTCTCTTTTGGATGGTGAAGGACAAAACCTTCCTTACAGGAATTTGATGGGAGCACAGCTACTCCATGACTTGGCAGGATAG 1860 0.4726 MARQVCEDKASSGFGYSDVSSGNPNPTMLVNQIQGFVSDPEMYNLTTGMEMIGFPKTDTNAVMWRSFIPKPGPSSSKTIHDSSTTFYHHDYNNNKHADFTPGNISETSAENLIVGTHHDSAPWQDNNNSNRFDDSSLRCVFPCEANERPSQGLSLSLSSTNPSTIGLQSFELRQTGHNPDFVSSSSRDGFFGKPVSVQQQQQQMLQDGYVSSNSKAASVYQQGHFLVKNSKYLMPAQDLLNEFCSLGAKQSEVGKPKSWLKKQQWEDQENNVNGIGSSKKHSLTSLELVELQKRKTKLLSMLEEVDRRYKHYRNQMKSVVSSFEAVAGNGAATVYSALALKAMSRHFRCLKDGILTQIEATRKGMGEKDPVAPGTTRGETPRLKVIDQALRQQRAFQQMSMMETHPWRPQRGLPERAVSVLRAWLFEHFLHPYPSDVSNWFINARVRLWKPMVEEMYLEEVKDPSENNGIGSSEVGAENIENVENPPSRSEADQKPSVMNNHSSPDNNKKGQEQCFGSVELDFSSYTHHSSGPGMVSYGSNDHNGNNSLQSGVSLTLGLQQHGVSLAFPSATQSSLYYHHSRDQMEDCQPIQYSLLDGEGQNLPYRNLMGAQLLHDLAG 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1730 619 MobiDBLite consensus disorder prediction 1 24 - -
Aed11g1730 619 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 9 576 - -
Aed11g1730 619 CDD homeodomain 407 452 IPR001356 GO:0003677
Aed11g1730 619 Gene3D - 437 469 - -
Aed11g1730 619 MobiDBLite consensus disorder prediction 478 513 - -
Aed11g1730 619 SUPERFAMILY Homeodomain-like 408 458 IPR009057 -
Aed11g1730 619 Gene3D - 402 436 - -
Aed11g1730 619 Pfam Associated with HOX 227 354 IPR006563 -
Aed11g1730 619 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 9 576 - -
Aed11g1730 619 Coils Coil 288 308 - -
Aed11g1730 619 SMART prehox3 221 356 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1730 Aed-Chr11 20888655 20893416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1730 141 618 Homeobox Transcription Factor Family AT5G41410 44.630 8.52e-119 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1730 - - gmx:100803088 1008.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1730 11 20888655 20893416 Aed11g1730 11 20888655 20893416 ECH
Aed11g1730 11 20888655 20893416 Aed5g2306 5 24805553 24809533 PCT
Aed6g1434 6 18734836 18738263 Aed11g1730 11 20888655 20893416 PCT