Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1726 ATGTCTTCTTCTGATCTCTATACTTTTGACATTTCTTGCCAAAGACATTCAAGCCCCGACAACATGGTATCCTATGATGGAGATGGAAATGGAAACCTTGTGTTTTACTCTGACCCTTACTCTTTTCCTCTCCTCACTGATGATGTGGCTCAAGCGAGTTTTAATACTTCTCTTGACCCTTATTTCTGCTCTTTTTCTCCTGAGAGCCTCTTTCAGGCTAACCCTGTGCAGCCTCTGTCTAATAATGTAAAGGGTGAGTCTTCTAGAAGTTTCTCTTCTTTGCATGGCTCCGAGGAATGCCAAATGGGTGTGGATTATCCCTACAATCAGCACTTTCTTACTCAAACTTGTCATGCTTCTGAAACTGCATCAAAGTTAATACAAAGGAGCTTCAGCTGCACCTCTTTCCCCTTTAAACCTCACCCTGACACTCTCATGGACTCTCCAAATTTCCAATGGCATGCTTTGAACTCCCCTGAAAGCATTTTCTTCATGAGGAGAGTGTGCAGTACAGGAGATTTGCAGAACATGAAAGCAACAGATATGTCTCAAACGGATAGCCCCTTGTTGGAGGAAACAAACTTCAAAGTAGGCCGTTATAGTGCCGAAGAAAGAAAAGAAAAAATCTCTAAATACAGAGCTAAGAGAAGCCAGAGGAAGTTCAACAAGATTATTAAGCAGTATGCATGCCGAAAGACACTAGCCGACAATCGAACCCGCATACGTGGCAGATTCGCACGCAACGATGAAATCAGCGAGATTCCGAAAGCACCTTCAACCACAGAAGAGTATGAAGAGGAGTTCTGGGTAATTAATTTATTCATTGCTCTTCTTAAATTTCAACAACACATATTCATGATATTGATATTGGTAATCAGTTAA 882 0.415 MSSSDLYTFDISCQRHSSPDNMVSYDGDGNGNLVFYSDPYSFPLLTDDVAQASFNTSLDPYFCSFSPESLFQANPVQPLSNNVKGESSRSFSSLHGSEECQMGVDYPYNQHFLTQTCHASETASKLIQRSFSCTSFPFKPHPDTLMDSPNFQWHALNSPESIFFMRRVCSTGDLQNMKATDMSQTDSPLLEETNFKVGRYSAEERKEKISKYRAKRSQRKFNKIIKQYACRKTLADNRTRIRGRFARNDEISEIPKAPSTTEEYEEEFWVINLFIALLKFQQHIFMILILVIS 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1726 293 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 60 271 IPR045281 GO:0009909
Aed11g1726 293 Pfam CCT motif 205 248 IPR010402 GO:0005515
Aed11g1726 293 PANTHER CCT MOTIF FAMILY PROTEIN 60 271 - -
Aed11g1726 293 ProSiteProfiles CCT domain profile. 205 248 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1726 Aed-Chr11 20867279 20868543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1726 201 253 C2C2-CO-like Transcription Factor Family AT5G24930 45.283 7.06e-08 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed11g1726 CCT 7.1e-14 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1726 - - gmx:100786853 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1726 11 20867279 20868543 Aed11g1726 11 20867279 20868543 ECH
Aed11g1726 11 20867279 20868543 Aed5g2302 5 24768736 24770925 PCT