Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1723 ATGTCATCATGGTGGGAAAAATCTTCATCCAAAGAGGTAAAGAGGAAATATAAAAGGAAAAGTATTATTGACACAATACAAAGGAAATTAAATAAATCAAGAGGGTCTCGGAGACATCATAGTCACACTATCTCAGAGAAGGGAACCAGATCCCTTGTGCCTACAAGATCACCATCACCCTCAACACATATCTCCTGTGGACAAAGTTTTGCAGAAAGGCCTCTTGCTCAGCCACTCCCACTCCCAGGGACGCACCGTCCCTTCACCAATCATGCAAATTCTGGAGCTAGTGTAACATCAAAACCAGAAAGCACCAGGGGCTTGAAGTCATCTCTATATTTCCCCTTACCAAAACCTGGTTGTGTTTTTAACAGGGGAGAACCTACAGATGCTGAGGAAGATATTGCCACTGCATCAATTTCTAGTGGCAGCTCTATTGACAGTGATGACCAATGTGAGTCACATTTCCTTAGTCCTCTGGCATCTGACTCTGAAAATGGAAACCGAGCTACCATTAACAGTACCGTCAGTGTGGTTCACAAGGATCAGCCACCCATTACTTTCCAAAAAAACTCAAGGGTATCCTCAAAACCAACTTCTCAACTGTGTAATCTTCAATTTCTATTTAACACACCCAGTGGGGCTTCTTTGCATCGGCCGAATCCACAAATAGCTTGTTCAGGTGGTTTATGGAGTGCTCCTGACAGTTCAATGTCAAGTCCTTCTAGAAGTCCACTGAGAACATTTGGTTCCCAGCAAGTTTTGAATTCTGGATTCTGTACAGGAAAGCCATATCCAGATCTAGCTTCTGGGCACTGCTCTAGTTCAGGTTCAGGCCATAATTCAGTTGGTGGGGATCTGACAGGGCAGATATTCTGGCCACAGAACAGGTGTAGCCCCGAGTGTTCTCCAATACCCAGTCCTGGAATGAAAAGTCCTGCTTTCAATTCCAGGATACACAGTGGTGCTGTCACCCCTCTTCATCCACGTGCCGGAAGTGCTACATCAGAATCGCCCACAAGACGTCCTGATGATGTGAAACAACAAACTTACCGATTACCTCTTCCTCCAATAACAATCCCTAATTATTGTCCATTTTCTCCAACATATTCTGCACCTACTACTCCTTCAGCACCTCGTAGTCCCGGCATAGCAGAAAATCTAACAAGCCCTGGCTCACGATGGAAAAAGGGGCAACTTCTTGGAAGGGGGACATTTGGGCATGTATATCTTGGTTTTAACAGTGAAAGTGGTGAGATGTGTGCAATGAAGGAGGTAACTCTTTTTTCAGATGATGCTAAATCAAGGGAAAGTGCTCAACAACTTGGCCAAGAAATTGCATTGCTAAGTCACCTGAGGCATTCAAATATAGTCCAATATTATGGATCTGAGACGGTAGATGACAAACTTTATATATACTTGGAGTATATCTCTGGTGGGTCAATCTATAAGTTGCTTCAACAATATGGCCAGCTTGGTGAAATTGTTATTCGTAATTATACTCGGCAAATTCTGTTAGGTCTTGCTTTTTTACATGCTAAAAACACTGTTCATAGAGACATTAAAGCAGCAAACATATTGGTGGATCCTAATGGGAGGGTCAAATTGGCAGATTTTGGTATGGCAAAACATATAAGCGGGCAATCCTGTCCATTATCTTTCAAAGGAAGTCCTTACTGGATGGCACCTGAGGTGATAAAAAATTCAAATGGTTGTAATCTTGCTGTTGATATATGGAGCCTTGGCTGCACCGTTTTCGAGATGGCTACAACTAAACCTCCTTGGAGCCAATATGAAGGGGTTGCGGCTATGTTTAAAATTGGAAATAGCAAGGACCTTCCTGCAATGCCAGATCATCTATCAGAAGATGGAAAAGATTTTATCAGGCAATGCTTGCGAAGGAATCCAGTGCATCGCCCCTCTGCTGCTCAACTTCTGCTGCATCCATTTGTTAAAAAAGCAACACTGGGAAGACCTATTCTGTCCATTGATCCTTTAGAAACAAAACCTGATTTTGTAAAAGCTATGAGATCTCTGGCCATTGGACCTGCAAAACATAATTTAGGCTTAGTTTCAGAAACAGCTGATACATATCTGTCTAGAAGCTCGAGAACTGGCACGGGATCAAGTGATGTCCATACAACAAGGAACATCTCACGTACGGTGTCTCCTACTGGGAGCCCACTTTTGCCACCTAGGTTACTGCATGTGACTGGAAGGCTATCTCCATCTCCCATATCTAGTCCTCACACTGCATCTGGCTCATCTACACCGCTCACTGGTGCAGTCCCTTTTCATCAGCCAACGATATCACAAAGGCCACCAAATGGGCGTTATTCAAATGGAAGCATTGCTTATCAGGAGTCAATGCATGACCCAATTTGGGGGCTTCTGAAGAGCACTTTTGCTTGCCCAGATATACTTTCACTTTCATCTAATAATGATGCTCTTGCTCTTGCTCTTGGAAACAACCATAATAGGAGGAGGGTTGGCCAGGGACAGGGACTCCCAAGACCAAGGGAATTTTATGATGGGAAGTCATATTTAGCTGATCGTGTATCGTAA 2565 0.4355 MSSWWEKSSSKEVKRKYKRKSIIDTIQRKLNKSRGSRRHHSHTISEKGTRSLVPTRSPSPSTHISCGQSFAERPLAQPLPLPGTHRPFTNHANSGASVTSKPESTRGLKSSLYFPLPKPGCVFNRGEPTDAEEDIATASISSGSSIDSDDQCESHFLSPLASDSENGNRATINSTVSVVHKDQPPITFQKNSRVSSKPTSQLCNLQFLFNTPSGASLHRPNPQIACSGGLWSAPDSSMSSPSRSPLRTFGSQQVLNSGFCTGKPYPDLASGHCSSSGSGHNSVGGDLTGQIFWPQNRCSPECSPIPSPGMKSPAFNSRIHSGAVTPLHPRAGSATSESPTRRPDDVKQQTYRLPLPPITIPNYCPFSPTYSAPTTPSAPRSPGIAENLTSPGSRWKKGQLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSRESAQQLGQEIALLSHLRHSNIVQYYGSETVDDKLYIYLEYISGGSIYKLLQQYGQLGEIVIRNYTRQILLGLAFLHAKNTVHRDIKAANILVDPNGRVKLADFGMAKHISGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVFEMATTKPPWSQYEGVAAMFKIGNSKDLPAMPDHLSEDGKDFIRQCLRRNPVHRPSAAQLLLHPFVKKATLGRPILSIDPLETKPDFVKAMRSLAIGPAKHNLGLVSETADTYLSRSSRTGTGSSDVHTTRNISRTVSPTGSPLLPPRLLHVTGRLSPSPISSPHTASGSSTPLTGAVPFHQPTISQRPPNGRYSNGSIAYQESMHDPIWGLLKSTFACPDILSLSSNNDALALALGNNHNRRRVGQGQGLPRPREFYDGKSYLADRVS 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1723 854 SMART serkin_6 395 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1723 854 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 790 - -
Aed11g1723 854 SUPERFAMILY Protein kinase-like (PK-like) 393 734 IPR011009 -
Aed11g1723 854 MobiDBLite consensus disorder prediction 87 106 - -
Aed11g1723 854 MobiDBLite consensus disorder prediction 8 31 - -
Aed11g1723 854 MobiDBLite consensus disorder prediction 741 757 - -
Aed11g1723 854 MobiDBLite consensus disorder prediction 699 732 - -
Aed11g1723 854 MobiDBLite consensus disorder prediction 370 391 - -
Aed11g1723 854 MobiDBLite consensus disorder prediction 141 168 - -
Aed11g1723 854 Pfam Protein kinase domain 396 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1723 854 MobiDBLite consensus disorder prediction 310 351 - -
Aed11g1723 854 CDD STKc_MEKK1_plant 394 651 - -
Aed11g1723 854 MobiDBLite consensus disorder prediction 1 106 - -
Aed11g1723 854 MobiDBLite consensus disorder prediction 47 68 - -
Aed11g1723 854 ProSitePatterns Protein kinases ATP-binding region signature. 401 424 IPR017441 GO:0005524
Aed11g1723 854 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 790 - -
Aed11g1723 854 MobiDBLite consensus disorder prediction 699 726 - -
Aed11g1723 854 Gene3D Transferase(Phosphotransferase) domain 1 393 670 - -
Aed11g1723 854 MobiDBLite consensus disorder prediction 738 757 - -
Aed11g1723 854 ProSiteProfiles Protein kinase domain profile. 395 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1723 Aed-Chr11 20834367 20844467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1723 4 767 MAP Kinase Kinase Kinase AT1G63700 61.245 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aed11g1723 Pkinase 4.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1723 K20717 - gmx:100777350 1401.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1723 11 20834367 20844467 Aed11g1723 11 20834367 20844467 ECH
Aed1g2286 1 18984694 18997155 Aed11g1723 11 20834367 20844467 ECH