Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1722 ATGGAGAGGGAGAGGGAGGAAGATGTTAAGGTTGGAGCACAGAAATTCTCAGAGAGGCAAGCGTTGGGAACAGGAGCTCAGAGCGACAAGGACTACAAGGAAGCACCGCCAGCACCGTTGTTTGAGGCAGGGGAGCTAAAGTCATGGTCTTTTTACAGAGCTGGAATTGCTGAGTTTGTGGGCACATTCTTGTTCCTCTACATCACTGTCTTAACAGTCATGGGTGTCAACAGGGCACCCACCAAGTGCTCCTCTGTTGGTATTCAAGGAATTGCATGGGCTTTTGGTGGCATGATCTTTGCCCTTGTCTACTGCACTGCTGGAATATCAGGTGGGCACATAAACCCGGCAGTGACGTTCGGTTTGTTTCTGGCTAGGAAGCTGTCCCTGACGAGAGCATTGTTCTACATTGTGATGCAATGCCTTGGAGCTATCTGTGGTGCTGGTGTGGTGAAGGGGTTTGAGGGGAATGCGCGGTATGAGTTGTACAAAGGTGGAGCCAATTTTGTGAATCATGGATACACCAAGGGTGATGGCCTTGGAGCTGAGATTGTTGGCACCTTTGTTCTTGTTTACACTGTCTTCTCCGCCACTGATGCCAAGAGAAACGCCAGAGACTCTCACGTCCCGATATTGGCACCCCTTCCAATCGGGTTTGCAGTGTTTTTGGTCCACTTGGCAACCATTCCTATAACAGGAACTGGGATTAACCCAGCTAGGAGTCTTGGTGCTGCTATAATATACAACAGAGACCATGCTTGGGATCACCATTGGATTTTCTGGGTTGGACCTTTCATTGGAGCTGCCCTTGCGGCCGTATATCACCAGATAGTGATCCGAGCAATTCCATTCAAGACAAGGGGTTGA 867 0.496 MEREREEDVKVGAQKFSERQALGTGAQSDKDYKEAPPAPLFEAGELKSWSFYRAGIAEFVGTFLFLYITVLTVMGVNRAPTKCSSVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFEGNARYELYKGGANFVNHGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWDHHWIFWVGPFIGAALAAVYHQIVIRAIPFKTRG 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1722 288 CDD MIP 53 278 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed11g1722 288 PRINTS Major intrinsic protein family signature 53 72 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed11g1722 288 PRINTS Major intrinsic protein family signature 218 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed11g1722 288 PRINTS Major intrinsic protein family signature 258 278 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed11g1722 288 PRINTS Major intrinsic protein family signature 182 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed11g1722 288 PRINTS Major intrinsic protein family signature 95 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed11g1722 288 PRINTS Major intrinsic protein family signature 132 151 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed11g1722 288 SUPERFAMILY Aquaporin-like 45 280 IPR023271 -
Aed11g1722 288 Gene3D Glycerol uptake facilitator protein. 38 286 IPR023271 -
Aed11g1722 288 MobiDBLite consensus disorder prediction 1 33 - -
Aed11g1722 288 ProSitePatterns MIP family signature. 113 121 IPR022357 -
Aed11g1722 288 TIGRFAM MIP: MIP family channel proteins 57 274 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed11g1722 288 Pfam Major intrinsic protein 45 275 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed11g1722 288 PANTHER AQUAPORIN PIP1-6 4 287 - -
Aed11g1722 288 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 4 287 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1722 Aed-Chr11 20828021 20829522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1722 5 287 Major Intrinsic Protein MIP AT3G61430 85.512 5.13e-174 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1722 K09872 - gmx:100796833 565.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1722 11 20828021 20829522 Aed11g1722 11 20828021 20829522 ECH