Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1708 ATGTATAGAAAACTCAGGGAAAAGATGAAGCCTTGTACTTCATTCTTGTTTTTCAGTTTCATTTCTACGCTCTCTTTTGTGGTTTCTAATACGGTGCCCTCAAATGAAGTTTGGGCGCTTAGGAGCCTCAAAGAAGCTGTCTATGAAGACCCATATCAAGTTTTATTCAATTGGGATACGGTGGAATCAGATCCTTGTAGCTGGTTTGGCGTCTCATGCACTATGGTTCGAGATCATGTCATCAAGCTCTGCTGCTGTTGTTGTTGGTGGTCGGGTGTACTGTTGCTATTTGACAAGGTTGATGACGTGAATTTCCAAGCTATCACATTTCTAGTACTAAAGATTGAGATTCTTCTTTGCAGAAACATATCAGGATCATCATTAAAGGGGTTTCTTCCACCAGAGCTGGGGCAAATCACCTATTTGCAAGAACTAATTTTGCATGGCAACAATTTCATTGGAATAATACCTAGAGAGTTGGGTGTGTTGAAATCTCTCAAGGTGTTGGATTTGGGATTGAATCAGTTAACGGGACCAATTCCTCCAGAGATTGGAAATCTAACCCAACTCGTGAAAGTAAACTTGCAGTCCAATGGGTTGACTGGCAGGCTACCTCCAGAGCTTGGAAACTTGAGATACCTTCAAGAACTTTGGCTGGATAGGAATAGGCTTCAAGGACCTGTTCCTGCTGGTTGTAGCTCAAATTTTGCTTCAAATATGCATGGGATGTATGCATCAAAGGAGAATGTAACTGGCTTTTGTCGTTCATCTCAGTTGAAAATGGCAGATTTCTCGTTTAATTTTTTAGTTGGTAGCATACCCAAATGCTTGGAGTATCTTCCAAGGTTAAGCTTTCAAGGGAATTGCCTCCAGGGCCAGGATTTAAAGCAGCGGTCTTCTATACAGTGTGCGGGTGCTTCACCTGCCAGGGCCAAGAGCCAGCCAGTGGTGCATCCAAACCACCAACCTGATGAATATGTGTCTAAGCATCACGGAGCATCGAAACCTGTTTGGCTTTTGGCTCTAGAAATAGTAACTGGAACTATGGTGGGCTCTCTTTTTCTGGTTGCTGTTCTTGCGGGTTTTCAGAGATGTAACAACAAATCATCTATCATTATTCCTTGGAAAAAATCTGGAAGCCAGAAAGATAATACAGCAGTATATATAGACCCTGAAATGTTGAAGGACGTGAGAAGGTATAGCAGACAAGAGCTTGAAGTTGCCTGTGAAGATTTCAGCAACATAATTGGGTCCTCACCAGATAGTGTGGTCTACAAGGGAACAATGAAAGGTGGTCCTGAGATTGCTGTGATTTCCCTCTGCATCAAGGAGGAGCAATGGATAGGATATCTTGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGGTTAAATCATGAGAATATAGGAAAACTACTGGGCTATTGTAGAGAAGACACTCCGTTTACAAGGATGTTGGTTTTTGATTATGCTTCAAATGGGACACTTCATGATCACCTACATTGTTATGAAGAAGGATGTCAATTCTCTTGGACTCGGCGTATGAAGATTGCCATAGGCATTGCACGTGGGCTCAAGTATTTGCACACAGAAGTGGAGCCTCCATTTACTATCTCAGAGCTGAATTCTAGTGCTGTATACCTTACAGAAGAATTTTTGCCTAAGTTGGTTGATTTTGAAAGTTGGAAGACAATTCTTGAAAGATCAGAAAAGAATTCTGGTTCCATTGGCAGCCAAGGTGCTATCTGTGTTCTTCCAAATTCCCTTGAAGCACGCCATCTTGATACCAAAGGAAACGTATTTGCTTTTGGGGTACTTCTGCTAGAGATAATCAGCGGGAGACCTCCATACTGTAAGGGCAAAGGGTACTTGGTTGACTGGGCCAAGGACTACCTTGAAATGACAGATGAAATGTCACGTGTGGTGGATCCCGAACTGAAATTTTTTAGAAATGAAGACCTCAAAGTGATATGCGAGGTAATAACTCTTTGTATCAACCCTGATACTACTATGCGTCCATCTATGCGAGAATTATGTAGCATGCTGGAGAGCAGAATTGACACATCAGCAAGCGTGGGACTCAAGTCATCATCTTTGGCTTGGGCTGAACTTGCACTTTTATCTTAA 2130 0.4235 MYRKLREKMKPCTSFLFFSFISTLSFVVSNTVPSNEVWALRSLKEAVYEDPYQVLFNWDTVESDPCSWFGVSCTMVRDHVIKLCCCCCWWSGVLLLFDKVDDVNFQAITFLVLKIEILLCRNISGSSLKGFLPPELGQITYLQELILHGNNFIGIIPRELGVLKSLKVLDLGLNQLTGPIPPEIGNLTQLVKVNLQSNGLTGRLPPELGNLRYLQELWLDRNRLQGPVPAGCSSNFASNMHGMYASKENVTGFCRSSQLKMADFSFNFLVGSIPKCLEYLPRLSFQGNCLQGQDLKQRSSIQCAGASPARAKSQPVVHPNHQPDEYVSKHHGASKPVWLLALEIVTGTMVGSLFLVAVLAGFQRCNNKSSIIIPWKKSGSQKDNTAVYIDPEMLKDVRRYSRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEQWIGYLELYFQREVADLARLNHENIGKLLGYCREDTPFTRMLVFDYASNGTLHDHLHCYEEGCQFSWTRRMKIAIGIARGLKYLHTEVEPPFTISELNSSAVYLTEEFLPKLVDFESWKTILERSEKNSGSIGSQGAICVLPNSLEARHLDTKGNVFAFGVLLLEIISGRPPYCKGKGYLVDWAKDYLEMTDEMSRVVDPELKFFRNEDLKVICEVITLCINPDTTMRPSMRELCSMLESRIDTSASVGLKSSSLAWAELALLS 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1708 709 Gene3D Transferase(Phosphotransferase) domain 1 492 697 - -
Aed11g1708 709 Pfam Protein tyrosine and serine/threonine kinase 414 683 IPR001245 GO:0004672|GO:0006468
Aed11g1708 709 Gene3D Ribonuclease Inhibitor 30 113 IPR032675 -
Aed11g1708 709 Gene3D Ribonuclease Inhibitor 114 301 IPR032675 -
Aed11g1708 709 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 15 88 - -
Aed11g1708 709 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 118 707 - -
Aed11g1708 709 PANTHER PROTEIN MALE DISCOVERER 2 15 88 - -
Aed11g1708 709 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Aed11g1708 709 Gene3D Phosphorylase Kinase; domain 1 383 491 - -
Aed11g1708 709 SUPERFAMILY L domain-like 34 284 - -
Aed11g1708 709 ProSiteProfiles Protein kinase domain profile. 410 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1708 709 PANTHER PROTEIN MALE DISCOVERER 2 118 707 - -
Aed11g1708 709 SUPERFAMILY Protein kinase-like (PK-like) 388 684 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1708 Aed-Chr11 20723766 20730926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1708 128 684 Receptor kinase-like Gene Family AT5G56040 28.115 3.98e-53 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Aed11g1708 PK_Tyr_Ser-Thr 2.2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1708 - - gmx:100794714 1209.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1708 11 20723766 20730926 Aed11g1708 11 20723766 20730926 ECH
Aed11g1708 11 20723766 20730926 Aed5g2266 5 24508298 24513987 PCT