Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1707 ATGGTTAGTAACACAGACACAAACAACAGCAACGAGAAGAAAGAGAAAGAGCTTGAGTTTTTCTTTGAGGACGACGATGGTGCACAACAGGATGTTGAAGCTGCTGCCAAGTTAGAGAGTGAAAGTGAGAGTAGCAGCGATGATGACGACGGAGGAAATGATACAACACGCCGTCAATCTTTCACCTCTCAGCAATGGCCTCAAAGTTACAAAGAGACCACGGATTCTTACACACTTGCTCCAGCTCCAAAGTTTGAGTCAATTCTACGAGTTCCAAGTATTATATATTCCAGTTTTGAGAATCGTTCAAAGAATAACTTAGACATAGATCGAAATACTCCTTTTCTCTCTGGTCACGAAGAATCAACATTGTGGAAGAAAGGTTCGGTGCAAAAGCATTTATCCGGTGAATTGCCCATTGGTCATGGATGCAGCCTCATTCAAACAGTTTTTAATGCAACTAATGTGATGGCTGGAGTTGGCATTCTGTCTACACCATATACATTGAAAGAAGCTGGGTGGATGAGCATGGTGTTTATGGTTCTTTTTGCAGTCATTTGTTGCTATACAGCCACCCTTATGAGATACTGTTTTGAAAGCAGAGAAGGGATCACTAGCTACCCAGATATAGGAGAAGCTGCTTTTGGAAAATATGGTCGTATTATTGTATCGATCATATTGTACACTGAATTATATTCGTGTTGTGTGGAATTCATCACCTTGGAAGGAGATAACCTCACTGGGCTATTTCCAGGAACATCCTTAGATTTGGGTAGTTTCCAGTTAGACTCTGTGCACTTGTTTGGAATTTTGGGTGCACTTATTATTATCCCAACTGTTTGGCTGAAGGATCTTCGTATAATCTCTTTACTGTCAGCTGGAGGGGTTTTTGCAACACTGTTGATTGTTATCTGTGTGTTTTGTATTGGGATGACAAACGGTGTTGGATTCCATCACACTGGTCAATTGGTCAATTGGAGTGGCATTCCATTAGCTATTGGTGTTGCAATCATGGGATTTCTCATGTTTGGTGATGACACTTCGTCTCAAATAACATTAAATATGCCACGAGGTGCATTTGCTTCCAAGGTTGCATTGTGGACGACAATTGTTTTTTCCTTAATTATACATAAATATGCTTTGTTGATAAACCCATTGGCAAGAAGTGTCGAGGAGTTGCTACCGGAGAGAATCTCAAGTACTTATCGGTGTTTCATTCTTCTTAGAACAGCACTTGTTGTATCCACAGTTTGTGCTGCTTTTCTGATTCCTTTTTTTGGGTTTGTGATGGCTTTAATTGGCTCTCTCTTCAGTATACTTGTGGTTGCATTGAGCGTCGTAATTACTACATTTGGAGTCGTTTGTGGAATTCTAGGAACATATTCGTCTGTGCTAAATATTGTGAATAGTTACTGA 1416 0.4025 MVSNTDTNNSNEKKEKELEFFFEDDDGAQQDVEAAAKLESESESSSDDDDGGNDTTRRQSFTSQQWPQSYKETTDSYTLAPAPKFESILRVPSIIYSSFENRSKNNLDIDRNTPFLSGHEESTLWKKGSVQKHLSGELPIGHGCSLIQTVFNATNVMAGVGILSTPYTLKEAGWMSMVFMVLFAVICCYTATLMRYCFESREGITSYPDIGEAAFGKYGRIIVSIILYTELYSCCVEFITLEGDNLTGLFPGTSLDLGSFQLDSVHLFGILGALIIIPTVWLKDLRIISLLSAGGVFATLLIVICVFCIGMTNGVGFHHTGQLVNWSGIPLAIGVAIMGFLMFGDDTSSQITLNMPRGAFASKVALWTTIVFSLIIHKYALLINPLARSVEELLPERISSTYRCFILLRTALVVSTVCAAFLIPFFGFVMALIGSLFSILVVALSVVITTFGVVCGILGTYSSVLNIVNSY 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1707 471 MobiDBLite consensus disorder prediction 9 23 - -
Aed11g1707 471 PANTHER AMINO ACID TRANSPORTER AVT1A 334 469 - -
Aed11g1707 471 PANTHER OS05G0424000 PROTEIN-RELATED 41 335 - -
Aed11g1707 471 PANTHER OS05G0424000 PROTEIN-RELATED 334 469 - -
Aed11g1707 471 MobiDBLite consensus disorder prediction 56 76 - -
Aed11g1707 471 MobiDBLite consensus disorder prediction 1 77 - -
Aed11g1707 471 Pfam Transmembrane amino acid transporter protein 144 336 IPR013057 -
Aed11g1707 471 PANTHER AMINO ACID TRANSPORTER AVT1A 41 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1707 Aed-Chr11 20716979 20721799 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1707 8 427 Amino Acid or Auxin Permease AAAP Family AT2G41190 55.717 1.93e-167 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1707 K15015 - gmx:100816368 738.028