Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1700 ATGTTGGAGGTTAAAAAGGAGCTCAATGATTCACCTTACCCAGATGGACTCCATTTAGATTTAAGTCTTTTTTCTCCCAATTGCAATAGCGAATCAACCCCAACTGCAGGGAGTATAAAAGCACGGGGTAGACGCTGGACAGAAGAAGAGGACAACCTTTTGACCGAGAAGGTCAAGAATCACAGTGGAAGGAACTGGAAGAAAATAGCTGCCTCTCTCCCTGGGCGAACTGATGTCCAATGCTTGCATCGCTGGCAAAAGGTTTTAGATCCTGATCTTGTGAAGGGTTCATGGACAAAGAAGGAAGATGATTGCCTCATTGAACTGATCAGAAAGTATGGTACCAAGAGATGGTCTGTTATTGCTAAATACTTGCCAGGTCGTATTGGAAAGCAATGCCGAGAGAGGTGGCACAATCATCTTGATCCGGCTGTAAAGAAGGATGCATGGACAGAGGAGGAGGAACTCATACTTGATTTCTATTATCAAATATACGGCAGTAAGTGGGCAGAAATTGCAAAGATTCTTCCCGGAAGAACTGACAATGCTATAAAAAATCATTGGAACTGCTCAATGAAGAAGAAATTGAATGCACCAGCATCACCCCTTGGGTGTGACATGAAAGTCGCCATTTCCGGTTTCTGCGCTTCTCGAATAAAGCCAGCACAGGTATTGGCTAAAGTGGAGGGTAAAAATTTAAACGGAATGGTTTCTCTAAAGCAGAGTCACGGGTTGTTGAATCACAGTGTTGATAATGACAACTTTCTAACAAAATTGAATCTTCAAAATGATTCGGGAGAGGAATCTTGCTCTGCTTCTTCATCTAGGGCCTCAAGACAGTGTCCTCTTGGCAGTACTGATACAGATGAGGCCTATGCCTATGAATCCCCGAAACGGCAAAAGGTTTCTCTTTCAGATTCAGATACAGAGTTTAATGTGTGTGATGAATTCAGTGAATCTCTAAGTCCAAAAACACACATGGCATATACTCCCCCAACGTCTATACTCAGGAATTACACTGGCGACATCAACCCAGAAACTGTGCTTAGAAACTTAGCAATGACCTATGAGAATGTTCCTTCTATTATAAGGAAAAGGACACCACCCAAGAAGCCAAGCTATTGCGACACTTCAGCAGAAGGTGTTATTGGCTTAGATAACTTCAAACTGAACAGGGGCTTGGTTTATCCCATTCCTTCGTAG 1203 0.4289 MLEVKKELNDSPYPDGLHLDLSLFSPNCNSESTPTAGSIKARGRRWTEEEDNLLTEKVKNHSGRNWKKIAASLPGRTDVQCLHRWQKVLDPDLVKGSWTKKEDDCLIELIRKYGTKRWSVIAKYLPGRIGKQCRERWHNHLDPAVKKDAWTEEEELILDFYYQIYGSKWAEIAKILPGRTDNAIKNHWNCSMKKKLNAPASPLGCDMKVAISGFCASRIKPAQVLAKVEGKNLNGMVSLKQSHGLLNHSVDNDNFLTKLNLQNDSGEESCSASSSRASRQCPLGSTDTDEAYAYESPKRQKVSLSDSDTEFNVCDEFSESLSPKTHMAYTPPTSILRNYTGDINPETVLRNLAMTYENVPSIIRKRTPPKKPSYCDTSAEGVIGLDNFKLNRGLVYPIPS 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1700 400 ProSiteProfiles Myb-like domain profile. 38 89 IPR001005 -
Aed11g1700 400 CDD SANT 149 189 IPR001005 -
Aed11g1700 400 Gene3D - 148 204 - -
Aed11g1700 400 CDD SANT 97 141 IPR001005 -
Aed11g1700 400 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 89 IPR017930 -
Aed11g1700 400 ProSiteProfiles Myb-like domain profile. 90 141 IPR001005 -
Aed11g1700 400 PANTHER TRANSCRIPTION REPRESSOR MYB5 34 248 - -
Aed11g1700 400 CDD SANT 45 89 IPR001005 -
Aed11g1700 400 ProSiteProfiles Myb-like domain profile. 142 192 IPR001005 -
Aed11g1700 400 Pfam Myb-like DNA-binding domain 95 141 IPR001005 -
Aed11g1700 400 Pfam Myb-like DNA-binding domain 45 89 IPR001005 -
Aed11g1700 400 Pfam Myb-like DNA-binding domain 147 189 IPR001005 -
Aed11g1700 400 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 146 196 IPR017930 -
Aed11g1700 400 SUPERFAMILY Homeodomain-like 92 188 IPR009057 -
Aed11g1700 400 SMART sant 94 143 IPR001005 -
Aed11g1700 400 SMART sant 146 194 IPR001005 -
Aed11g1700 400 SMART sant 42 91 IPR001005 -
Aed11g1700 400 Gene3D - 42 94 - -
Aed11g1700 400 Gene3D - 95 146 - -
Aed11g1700 400 MobiDBLite consensus disorder prediction 267 285 - -
Aed11g1700 400 MobiDBLite consensus disorder prediction 267 290 - -
Aed11g1700 400 SUPERFAMILY Homeodomain-like 40 96 IPR009057 -
Aed11g1700 400 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 145 IPR017930 -
Aed11g1700 400 PANTHER MYB PROTEIN-RELATED 34 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1700 Aed-Chr11 20673468 20675453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1700 35 368 MYB Transcription Factor Family AT3G09370 41.854 7.17e-77 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed11g1700 Myb_DNA-binding 1.5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1700 - - gmx:100814774 518.079