Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1698 ATGGCCACGACAAGGTCATCGTCCGAGGACATAGTCGATTCCACGCCGCTGCTCGCCAATTCCGGCGGCTCCTCCGACGAGCTCACCTCCGGGCGTCGATTCGCGCGGCGGCAGAGGCTCCATCAGGCAGCGCGGTTCCTCCGGCAGGCGAGCGGGCGGAGGATGATGCGTGAGCCGTCGATGGTGGTCCGGGAGGCGGCGGCGGAGCAACTGGAGGAGCGGCAGAGCGACTGGGCGTATTCGAAGCCGGTGGTTGTACTGGACATAGTGTGGAACCTGGCGTTCGTAGTGGTGGCGGGGAGCGTGCTGGTTTTGAGCGCGAGCGAAGCGCCGGGCATGCCTCTGAGACTGTGGATTGTAGGGTACGCTATGCAATGCGTCCTTCACATGGTTTGCGTTTGTGTTGAGTATAGGAGGCGGAGGAGGCAGCAACGCGCCACCGCGCTTTCAGTGCAAGACAGCAGTAGTGGTAATTTGAGTGTCTCTTCCAGGGAGGGTTCTGCCTCGGGCTCTGCGCAGTATGTGTCGTTGGGCCAACTCGATGACGAGGCTACTAGTGTTGCAAAGCATTTAGAATCAGCCAATACAATGTTTTCATTTATTTGGTGGATTATTGGATTCTACTGGGTATCAGCTGGGGGTCAAGCGTTGGCCCAAGACTCTCCTCAGCTTTACTGGCTATGTATAATCTTCCTGGGTTTTGATGTTTTCTTTGTCGTTTTCTGTGTTGCACTGGCATGTATCATTGGAATTGCTGTTTGCTGTTGCCTTCCATGTATCATTGCACTTCTTTATGCAGTTGCAGACCAGGAAGGGGCATCAAAGGAAGACATTGAGCAGTTATCAAAATTTAAGTTCCGAAGAATTGAAAGCAATGAGAAACTTGCTGGTACTATACAAGGACCTGTTGGAGGAATAATGACCGAATGCCAGGCTGATTCACCTATTGAACATGTTCTTGCTGAGGAGGATGCGGAATGTTGCATCTGCCTTTCTTCTTATGACGATGGGGTTGAGCTAAGAGAACTTCCTTGTGGTCACCATTTTCACTGTGTATGTGTGGATAAATGGCTGTATATTAATGCTACATGCCCCCTCTGCAAGTATAACATCATAAAAAGTAGCAACCTCAGTCAAGAGGAAGTGTAA 1149 0.5161 MATTRSSSEDIVDSTPLLANSGGSSDELTSGRRFARRQRLHQAARFLRQASGRRMMREPSMVVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVVVAGSVLVLSASEAPGMPLRLWIVGYAMQCVLHMVCVCVEYRRRRRQQRATALSVQDSSSGNLSVSSREGSASGSAQYVSLGQLDDEATSVAKHLESANTMFSFIWWIIGFYWVSAGGQALAQDSPQLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFRRIESNEKLAGTIQGPVGGIMTECQADSPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCVCVDKWLYINATCPLCKYNIIKSSNLSQEEV 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1698 382 MobiDBLite consensus disorder prediction 1 30 - -
Aed11g1698 382 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 3 382 - -
Aed11g1698 382 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 307 376 IPR013083 -
Aed11g1698 382 PANTHER TARGET OF ERK KINASE MPK-1 3 382 - -
Aed11g1698 382 SUPERFAMILY RING/U-box 317 374 - -
Aed11g1698 382 CDD RING-H2_RNF111_like 326 370 - -
Aed11g1698 382 SMART ring_2 327 367 IPR001841 -
Aed11g1698 382 MobiDBLite consensus disorder prediction 1 28 - -
Aed11g1698 382 Pfam Ring finger domain 326 368 IPR001841 -
Aed11g1698 382 ProSiteProfiles Zinc finger RING-type profile. 327 368 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1698 Aed-Chr11 20660364 20663737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1698 14 375 C3H Transcription Factor Family AT1G68070 48.767 8.28e-119 346
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1333 6 18027382 18033132 Aed11g1698 11 20660364 20663737 PCT