Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1697 ATGGGCAAGGCATCGAAATGGTTTCGCGGGCTTCTGGGCCTGAAAAGAGTAGCAGAGTTGCCATCCAAAGAAAAACCTCGCTGGAGCTTTGTCAAGTCTTACAGGGAAAGGGAAAAGGAAAAGGACCAGACCACCGCCGGAGGCATTACTCCACCAGAATGGGCTGCCATTAAGATTCAAGCCGCCTTTCGAGGTTCTTTGGCAAGGAAAGCCCTTCGAGCGTTAAAAGGATTGGTGAAACTACAGGCCTTAGTGAGAGGTCACATTGAGAGGAAGCGCACAGCAGAGTGGCTGCAAAGGGTGCAGGCCCTGTTACGTGTACAGGCCCAAATTTGGAATGCAAAGTCCTCATCCACTGCTCACCTCCATCTCCATGGTCCAGCTCCAGCAACACCAGACAAATATGATCAGTCATCATCAGTACTCAAGAGAAACAGCTCCAAATCCCGCATTGATGATGAACAAGCACACATGACAACATCAAAACGTGGAAACCTGTTTTACTCCTCTAGCCAGAAGCAGAAGCAGCAAGCTATGGTTTCGGATCATATTAATTACAGTCCATCGAATAGTCCTCAAGCCTCTTCAAATTTAGGTAGTCCTTTAACTCCTAGCAGGAGTACTGATGGTTCAAGAAGCCACCTAAGTGGTTATTCAGAGCCTGAGTATCCAAGTTACATGGCATACACTGAGTCTTCAAAGGCAAAGTTAAGATCTCTCAGTGCTCCAAAGCAGAGGTACTCGCTTCATCAATCTAAATTGCACACGCAAAGGATACACGCAACCTTCAATAACAAACCAGCTTACCTTGCTACTGCTCGTTTGGACAACTTTGGCCTTGGGTTGCCACCTCTACCGCCGCTGCCGTATAAATACTGA 879 0.4744 MGKASKWFRGLLGLKRVAELPSKEKPRWSFVKSYREREKEKDQTTAGGITPPEWAAIKIQAAFRGSLARKALRALKGLVKLQALVRGHIERKRTAEWLQRVQALLRVQAQIWNAKSSSTAHLHLHGPAPATPDKYDQSSSVLKRNSSKSRIDDEQAHMTTSKRGNLFYSSSQKQKQQAMVSDHINYSPSNSPQASSNLGSPLTPSRSTDGSRSHLSGYSEPEYPSYMAYTESSKAKLRSLSAPKQRYSLHQSKLHTQRIHATFNNKPAYLATARLDNFGLGLPPLPPLPYKY 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1697 292 Pfam IQ calmodulin-binding motif 54 73 IPR000048 GO:0005515
Aed11g1697 292 Pfam IQ calmodulin-binding motif 79 93 IPR000048 GO:0005515
Aed11g1697 292 ProSiteProfiles IQ motif profile. 76 103 IPR000048 GO:0005515
Aed11g1697 292 PANTHER CALMODULIN BINDING PROTEIN IQD22 52 260 - -
Aed11g1697 292 MobiDBLite consensus disorder prediction 121 223 - -
Aed11g1697 292 Pfam Protein of unknown function (DUF4005) 192 253 IPR025064 -
Aed11g1697 292 PANTHER IQ-DOMAIN 5-RELATED 52 260 - -
Aed11g1697 292 Gene3D - 5 78 - -
Aed11g1697 292 ProSiteProfiles IQ motif profile. 53 80 IPR000048 GO:0005515
Aed11g1697 292 MobiDBLite consensus disorder prediction 160 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1697 Aed-Chr11 20655136 20657751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1697 1 38 IQD Protein Family AT4G23060 49.020 7.93e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1697 - - gmx:100814244 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1697 11 20655136 20657751 Aed11g1697 11 20655136 20657751 ECH
Aed6g1331 6 18016799 18021769 Aed11g1697 11 20655136 20657751 PCT