Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1690 ATGAACATTTTCAAATCCCCACTCGACCATGAGTCAGAAGCATCGGAAACAAGATCAAGAAGCGCCCACACAGACGAAGAAGTGATTAATCTAGCGTCAGCGCGGCCGAAGAAGCGAGCGGGGCGAAGAGTATTCAAGGAGACAAGGCATCCCGTGTACCGAGGAGTGCGTCGCAGGAACAAGAACAAGTGGGTCTGCGAGATGCGAGTCCCCAACAACAATTCACGGATTTGGCTCGGGACATACCCAACGCCCGAAATGGCCGCACGTGCACACGACGTTGCCGCCCTCGCCCTCAGAGGAAAGTCCGCCTGCCTCAACTTCGCCGACTCCGTCTGGCGCCTCACGGTGCCGGCCACCACCGATGCGGAGGAGATACGGCGTGCGGCTGTCGAGGCTGCTGAGGCATTTGCAGCTGATCAGACTGAGGACCAACAGCAGAAGAAGAGTGTGAATATTGAACAAGTTGATCAAGATCCTCTGCAGCAAAACGAGGTTCAAGACTGCCACGATTTGCTTCTCAGTATTGCGAATGAGCCTTTGATGTCTCCTCCGAGGGACTGGAATGACGTCGACATATTTCATGATCATGATGATCAAGATCCTGTTCCTGTGTATAGATAA 624 0.5353 MNIFKSPLDHESEASETRSRSAHTDEEVINLASARPKKRAGRRVFKETRHPVYRGVRRRNKNKWVCEMRVPNNNSRIWLGTYPTPEMAARAHDVAALALRGKSACLNFADSVWRLTVPATTDAEEIRRAAVEAAEAFAADQTEDQQQKKSVNIEQVDQDPLQQNEVQDCHDLLLSIANEPLMSPPRDWNDVDIFHDHDDQDPVPVYR 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1690 207 MobiDBLite consensus disorder prediction 1 25 - -
Aed11g1690 207 SUPERFAMILY DNA-binding domain 52 111 IPR016177 GO:0003677
Aed11g1690 207 ProSiteProfiles AP2/ERF domain profile. 52 109 IPR001471 GO:0003700|GO:0006355
Aed11g1690 207 MobiDBLite consensus disorder prediction 189 207 - -
Aed11g1690 207 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1 196 - -
Aed11g1690 207 Pfam AP2 domain 51 101 IPR001471 GO:0003700|GO:0006355
Aed11g1690 207 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 1 196 IPR045277 GO:0003700
Aed11g1690 207 CDD AP2 53 111 IPR001471 GO:0003700|GO:0006355
Aed11g1690 207 SMART rav1_2 52 115 IPR001471 GO:0003700|GO:0006355
Aed11g1690 207 MobiDBLite consensus disorder prediction 185 207 - -
Aed11g1690 207 Gene3D AP2/ERF domain 52 110 IPR036955 GO:0003700|GO:0006355
Aed11g1690 207 PRINTS Ethylene responsive element binding protein signature 53 64 IPR001471 GO:0003700|GO:0006355
Aed11g1690 207 PRINTS Ethylene responsive element binding protein signature 75 91 IPR001471 GO:0003700|GO:0006355
Aed11g1690 207 MobiDBLite consensus disorder prediction 9 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1690 Aed-Chr11 20610697 20611433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1690 29 192 AP2-EREBP Transcription Factor Family AT1G63030 54.878 6.26e-61 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aed11g1690 AP2 2.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1690 - - gmx:100789097 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1690 11 20610697 20611433 Aed11g1690 11 20610697 20611433 ECH
Aed1g2222 1 18507936 18508550 Aed11g1690 11 20610697 20611433 ECH
Aed6g1323 6 17961000 17961542 Aed11g1690 11 20610697 20611433 PCT