Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1683 ATGGGATGCTATGTACATGGTTATAGAATGTCACTATGGAGCGAGCATATAGGAGCTGTGGAAGAATGTTTTGAGGAACCAGAAAGCCTTGAATGTGTAAGACGGATAAGGTCATTGAGTGAGTTTAACTGGAGACAATATGCAGCTGAAGAGGTGACTGAAATGAAAAGCCATCTATTAAAATATCCGCTTGAAGTTGATTCAAAGGGCAAAGTGAAGCCTCTTTTTGGTTGTGAGACGTTCCCAGACGTTGGTGGGAACATAAGTGGCACCTTCACAGTACTCAAAGAAAATCTAACCATCTGA 306 0.415 MGCYVHGYRMSLWSEHIGAVEECFEEPESLECVRRIRSLSEFNWRQYAAEEVTEMKSHLLKYPLEVDSKGKVKPLFGCETFPDVGGNISGTFTVLKENLTI 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1683 101 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 5 101 - -
Aed11g1683 101 Pfam Phospholipase D C terminal 21 91 IPR024632 -
Aed11g1683 101 PANTHER PHOSPHOLIPASE D 5 101 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1683 Aed-Chr11 20552502 20558421 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1683 5 101 Phospholipase D Gene Family (Wang group) AT4G11850 70.103 5.60e-47 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1683 K01115 - gmx:100786241 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1683 11 20552502 20558421 Aed11g1683 11 20552502 20558421 ECH