Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1663 ATGGATCCTATTACAGCACACGGGCATTCTCTTCCCCCTCCTTTCCACGCTGCAGCAAGAGATCTCCACCTCCATGGCCACCACCAACAGTTCCACACCTTACAAGATGACGAGCAAAGCGGAAGCAGCGGAGGCCTAAACCTCGCACACAAAAGGGAACGTGATCAAGAAAACAATAACAGTGATGGAAAAGAAGATGGAGGTGGTGGCTCCGGCGAAACCGAGATTTCAAGAAGACCTCGTGGAAGACCCTCCGGATCCAAGAACAAACCCAAACCCCCCATCATCATCACCCGCGACAGCGCCAACGCCCTCAAAACCCACGTCATGGAAGTCGCCGACGGCTGCGACATCGTCGAGAGCGTCTCCGCCTTCGCCCGCCGCCGCCAGAGAGGAGTTTGCATCATGAGCGGCACCGGAACCGTGACCAACGTGACCCTAAGGCAACCGGCTTCTTCGGGCGCCGTGGTGACTCTCCACGGAAGGTTCGAAATCTTGTCGCTGGCGGGATCCTTCCTGCCACCGCCGGCGCCGGCAGCAGCGTCGGGTTTGACGATATACTTAGCCGGAGGACAAGGGCAGGTTGTAGGAGGAAGCGTGGTTGGAGCACTGATTGCTTCGGGGCCCGTGGTTATCATGTCAGCTTCGTTCAGCAACGCTGCGTATGAGAGGCTTCCTTTGGAAGATGAAGACCCTAATTCGCTGCAGCTTCAGCAAGGAGCTGCTTCGATTGGGTCACCGCAGCAGCTTATGGGAGGGGACTCGACCACTACTACTACTACTGCGCCTCTTTTTCATGGTTTGAATCCTCCGAACCTTCTCAATTCGGTTCAGATGCCGTCCTCCGAAACGTTCTGGGCAACGGGTCGCTCTCCTTACTGA 882 0.5658 MDPITAHGHSLPPPFHAAARDLHLHGHHQQFHTLQDDEQSGSSGGLNLAHKRERDQENNNSDGKEDGGGGSGETEISRRPRGRPSGSKNKPKPPIIITRDSANALKTHVMEVADGCDIVESVSAFARRRQRGVCIMSGTGTVTNVTLRQPASSGAVVTLHGRFEILSLAGSFLPPPAPAAASGLTIYLAGGQGQVVGGSVVGALIASGPVVIMSASFSNAAYERLPLEDEDPNSLQLQQGAASIGSPQQLMGGDSTTTTTTAPLFHGLNPPNLLNSVQMPSSETFWATGRSPY 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1663 293 MobiDBLite consensus disorder prediction 25 96 - -
Aed11g1663 293 PIRSF ESCAROLA 16 292 IPR014476 GO:0003680
Aed11g1663 293 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 7 293 IPR014476 GO:0003680
Aed11g1663 293 MobiDBLite consensus disorder prediction 245 267 - -
Aed11g1663 293 Pfam Plants and Prokaryotes Conserved (PCC) domain 106 219 IPR005175 -
Aed11g1663 293 Gene3D - 105 242 - -
Aed11g1663 293 SUPERFAMILY AF0104/ALDC/Ptd012-like 102 237 - -
Aed11g1663 293 MobiDBLite consensus disorder prediction 48 82 - -
Aed11g1663 293 CDD DUF296 106 173 IPR005175 -
Aed11g1663 293 ProSiteProfiles PPC domain profile profile. 102 238 IPR005175 -
Aed11g1663 293 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 7 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1663 Aed-Chr11 20445382 20446263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1663 1 293 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 54.711 1.46e-86 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1663 - - gmx:100781436 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1663 11 20445382 20446263 Aed11g1663 11 20445382 20446263 ECH