Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1652 ATGAAAGTTGATTCTCTGTTGTTTGTAGTGGCGGTTGCATTATTTCTGATAATTCCTGATATGGCAGTTGGAACTGCGGAGCTTAGAGCTCTGATGGAGTTGAAGTCCTCTCTGGATCCGGAGGGGAAGATCCTAGGGTCGTGGATCAGTGACGGTGATCCATGCAGCAGTGACTTCTTTGAAGGGGTTGCGTGCAACCAGCACCGCAAAGTGACTAACATCTCCTTGCAGGGAAAGGGTCTTTCTGGTTGGTTATCTCCTGCGCTCGCTGAACTCAAATGCTTGTCTGGTTTATATCTGCACTACAACAACCTTTCTGGTCAGATACCCCCACACATTTCAAATCTCACTCAACTTCTTGATCTCTATCTCGACGTCAATAGTTTATCTGGAACTATCCCTCCTCAGATCAGTAACATGGCTAGTCTCCAAGTGCTGCAGTTGGGAGATAACCAGTTGGTGGGGAATATACCTACACAGATGGGTTCCTTAAAGCACCTTAGTACTCTTGCTTTGCAATATAACAAGTTAACCGGTCAAATTCCTCTTAGCTTGGGGAACTTGGAGAAGCTAACCAGGCTAAATTTGAGCTTCAACAACTTCAGTGGTACTGTTCCGGCAACACTAGCACATATTCAACACTTGGAACTCCTAGATATTCAGAACAATTCTTTATCAGGAATTGTTCCTTCGGCATTGAAGAGACTTGGGGAAGGATTCCAAGGTGCAAACAACAACCCGGGTTTATGTGGAGTTGGGTTTTCTACTTTGAGAGCCTGCAACAAAGATCAAGATTTAAACGTTAACCATATTGATACCTCAGATGGAATTGGAGACCAAACAAAAAATAGTAATTCTTCAAAGGCGCTCCCTGAGCCTGCATATGTTCAGTTGCATTGTGGCCAGACCCATTGTTCAAAATCAAGAAGGTTTCCTCAAACTGTCATCACAGCAAGTGTTATAATCGTTACTCTTACATTCATATGTGCTGGATTTTTGACATTCTTCATATACCGCCGTCAAAAGCAGAGGATTGGCAATACATCAAGTTCTTCTTCTGAAAGGAAACTCAGTCCTGACCAGCCTAAAGAGTTCTACACAAAATGTCCATCTGCACTTGTTAATATTGAGTATTACAGTGGATGGGATCCTGATGCAGGTGGATTATCCAATGAATATTTAAATCAGTTTAGGTTTAATGTGGATGAGGTTGAATCTGCAACACAGTACCTTTCGGAAGCCAATTTACTTGGTAAGAGCAAATTCTCAGCAGTTTACAAAGGAGTTCTCAGAGATGGTTCTCTTGTGGCCATTAGAAGCATTAGTGTGACATGCTGCAAAGCCGAGGAAGCTGAATTTGTAAAGGGGCTGAACTTATTAACCTCTCTGAGACATGAAAACCTTGTTAGGCTGAGAGGTTTTTGTTGCTCAAGGAGTAGAGGTGAATGTTTCCTTATCTATGACTTTGCCACCATGGGTAACCTGTCTCAATATCTCGACATAGAAGATGGAAGTGCCCATGTGCTTGAGTGGTCCAAGAGAGTTTCTATCATCAAGGGCATTGCAAAGGCAGGTATTGGATATCTTCATAGCAATGAAGAAAGCAAACCTAGAATAGTGCACCAGAATATTTCAGTGGAAAATGTTGTCCTAGACCATGAGTGGAACCCATTGATCATAGATGCTGGACTACCTAAGCTTCTTGCAGATGATGTTGTTTTCTCAGCTCTAAAAGTAAGTGCTGCAATGGGATACTTAGCTCCCGAATACATTACTACTGGACGCTTTACTGAGAAGAGTGACATATATGCATTTGGAGTTATTATTCTTCAAGTCCTATCTGGCAAGACCACAATAGGCAGTTCAATACGAACGGCAGTTGAGTCTTTCAGATTTGATGATTCTGTTGACACAAATCTTAGGGGAATATATTCTATATCTGAAGCAGCAACACTTTCGAAGCTTGCAATACAGTGTACTCATGAACTTCCTGACCAAAGACCAACCATGGTGGATGTAATTCAGGAGCTGACTGTGTTTTCTGCTCATTTATAA 2055 0.4204 MKVDSLLFVVAVALFLIIPDMAVGTAELRALMELKSSLDPEGKILGSWISDGDPCSSDFFEGVACNQHRKVTNISLQGKGLSGWLSPALAELKCLSGLYLHYNNLSGQIPPHISNLTQLLDLYLDVNSLSGTIPPQISNMASLQVLQLGDNQLVGNIPTQMGSLKHLSTLALQYNKLTGQIPLSLGNLEKLTRLNLSFNNFSGTVPATLAHIQHLELLDIQNNSLSGIVPSALKRLGEGFQGANNNPGLCGVGFSTLRACNKDQDLNVNHIDTSDGIGDQTKNSNSSKALPEPAYVQLHCGQTHCSKSRRFPQTVITASVIIVTLTFICAGFLTFFIYRRQKQRIGNTSSSSSERKLSPDQPKEFYTKCPSALVNIEYYSGWDPDAGGLSNEYLNQFRFNVDEVESATQYLSEANLLGKSKFSAVYKGVLRDGSLVAIRSISVTCCKAEEAEFVKGLNLLTSLRHENLVRLRGFCCSRSRGECFLIYDFATMGNLSQYLDIEDGSAHVLEWSKRVSIIKGIAKAGIGYLHSNEESKPRIVHQNISVENVVLDHEWNPLIIDAGLPKLLADDVVFSALKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIILQVLSGKTTIGSSIRTAVESFRFDDSVDTNLRGIYSISEAATLSKLAIQCTHELPDQRPTMVDVIQELTVFSAHL 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1652 684 Gene3D Phosphorylase Kinase; domain 1 388 489 - -
Aed11g1652 684 Gene3D Ribonuclease Inhibitor 24 179 IPR032675 -
Aed11g1652 684 SUPERFAMILY Protein kinase-like (PK-like) 389 680 IPR011009 -
Aed11g1652 684 Gene3D Transferase(Phosphotransferase) domain 1 492 683 - -
Aed11g1652 684 ProSiteProfiles Protein kinase domain profile. 411 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1652 684 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 680 - -
Aed11g1652 684 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 7 680 - -
Aed11g1652 684 SUPERFAMILY L domain-like 33 234 - -
Aed11g1652 684 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Aed11g1652 684 Pfam Leucine rich repeat 142 201 IPR001611 GO:0005515
Aed11g1652 684 SMART LRR_typ_2 212 235 IPR003591 -
Aed11g1652 684 SMART LRR_typ_2 140 164 IPR003591 -
Aed11g1652 684 SMART LRR_typ_2 92 116 IPR003591 -
Aed11g1652 684 SMART LRR_typ_2 188 211 IPR003591 -
Aed11g1652 684 Gene3D Ribonuclease Inhibitor 180 246 IPR032675 -
Aed11g1652 684 Pfam Protein tyrosine and serine/threonine kinase 415 677 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1652 Aed-Chr11 20372814 20375489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1652 8 524 Miscellaneous Gene Families AT4G22730 55.849 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Aed11g1652 PK_Tyr_Ser-Thr 1.3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1652 - - gmx:100797612 1191.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1652 11 20372814 20375489 Aed11g1652 11 20372814 20375489 ECH