Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1640 ATGTTACGCGTTGCCACTGCCATTGTGATTGTGCATGCAACGTTCAACACGGAACTGGACTATGGTCTAAAATTGCGGAAAGTTCCTCATCATGTTGGATTCAACTCAGTTCCCAATTGGCTTCTCATTCTTAAGGAAGAGAAGTTTTTCAGTCGCTGTTTGATTCATGATTGTGTAAAGAAGAACATTTTTTGCTTGGATTGCTGCACAAGCATTTGCCTCAACTGCTTGCCCTTTCACGGCTCACACGTCCTTTTGCAGATACGAAGATACATGTACAATGACGTATTACGGCTTGATGATGCACAAACATTGTTGAATTGTTCCCTTGTTCAACCGTACACAACAAATAAAACTAAAGTTGTATATTTGAAGCAAAGGGCACCCTGCAGCCGGCCTCAGAAAGGCTCAAGCAACACTTGCATCACATGTGACCGTAACCTCCAAGTCCCATACATCTTCTGCTCTGTGTCATGCAAGGTGCATCATCATCTTCTACTAATTACCAAAAGCACAAGCATTAAGTATGAGTTGTCTGTTGTTCTACTTGACAAAGAAACACAACAAATTGAAGATAGCCAGATTACAACAGATTCGTTATGCACCGTGTCTGGGTCAACGAGTACTAATAACAGTGGGAGTGTGAATGAGTCACTAAAAAAGAAACGTAGCAGTGTTGATATGGTGCCAGAAATTTGGTATACCATGGTGAACCGGCGAAAAGGTGTCCCTCATCGATCTCCATTCTACTGA 753 0.421 MLRVATAIVIVHATFNTELDYGLKLRKVPHHVGFNSVPNWLLILKEEKFFSRCLIHDCVKKNIFCLDCCTSICLNCLPFHGSHVLLQIRRYMYNDVLRLDDAQTLLNCSLVQPYTTNKTKVVYLKQRAPCSRPQKGSSNTCITCDRNLQVPYIFCSVSCKVHHHLLLITKSTSIKYELSVVLLDKETQQIEDSQITTDSLCTVSGSTSTNNSGSVNESLKKKRSSVDMVPEIWYTMVNRRKGVPHRSPFY 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1640 250 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 35 250 - -
Aed11g1640 250 Pfam PLATZ transcription factor 89 161 IPR006734 -
Aed11g1640 250 SUPERFAMILY B-box zinc-binding domain 51 91 - -
Aed11g1640 250 PANTHER BNAA09G38660D PROTEIN 35 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1640 Aed-Chr11 20326369 20331231 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Aed11g1640 PLATZ 2.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1640 - - gmx:100806286 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1640 11 20326369 20331231 Aed11g1640 11 20326369 20331231 ECH