Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1638 ATGTCGGCTTACAAAGACCAGGATCCCCGTCTTCATGGCATCAAAACTAAGATTCGGGTCGTCCCCAATTTCCCCAAATCCGGTATCATGTTCCAAGACATTACTACTCTATTGCTTGATCCCAAAGCATTTAAGGACACAATAGATTTGTTCGTTGAGCGGTACAAGGGCAAAAACATTTCTGTTGTTGCAGGAATTGAAGCTCGAGGTTTTATTTTTGGTCCTCCCATTGCGCTGGCTATAGGAGCAAAGTTTGTACCATTGAGGAAACCAAAGAAGTTGCCTGGAAAAGTTATTTCTCAAGAATATATCCTGGAATATGGAAGGGACTGTCTTGAGATGCATGTAGGAGCTGTTGAACCCGGTGAGCGTGCTTTAGTGGTTGATGACTTGATTGCAACTGGTGGAACACTCTGTGCAGCTATGGACTTGTTAGAACGTGTGGGAGCAGAAGTAGTGGAGTGTGCATGTGGTCGTGAACGTTTGAACGGGAAGCCGTTGTACGTGTTGGTGGAATATGTGGAGATATGA 531 0.4482 MSAYKDQDPRLHGIKTKIRVVPNFPKSGIMFQDITTLLLDPKAFKDTIDLFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISQEYILEYGRDCLEMHVGAVEPGERALVVDDLIATGGTLCAAMDLLERVGAEVVECACGRERLNGKPLYVLVEYVEI 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1638 176 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 3-RELATED 2 172 - -
Aed11g1638 176 TIGRFAM apt: adenine phosphoribosyltransferase 14 156 IPR005764 GO:0003999|GO:0005737|GO:0006168
Aed11g1638 176 Pfam Phosphoribosyl transferase domain 50 157 IPR000836 -
Aed11g1638 176 CDD PRTases_typeI 48 172 IPR000836 -
Aed11g1638 176 Gene3D - 2 173 IPR029057 -
Aed11g1638 176 SUPERFAMILY PRTase-like 12 165 IPR029057 -
Aed11g1638 176 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 2 172 - -
Aed11g1638 176 Hamap Adenine phosphoribosyltransferase [apt]. 14 173 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1638 Aed-Chr11 20310591 20315709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1638 1 172 PRT Gene Family AT1G27450 71.111 1.32e-89 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1638 K00759 - gmx:100306411 342.813