Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1628 ATGGACGAACCGAGCGAAGCAGCACAGGACAACAGAGAACTCTACGCACTCTTGAACTTGTCTCCAGAAGCTTCCGATGAAGAAATTCGCAGAGCCTATCGTCAATGGGCGCAAGTCTATCATCCCGATAAATACCAAGCTCCTCACATGAAGGATATTGCCACGGAGAACTTCCAGCGCATATGCGAAGCCTATGAGATTCTCTCAGATCCAAATAAAAGGCAAATATATGATATCTACGGCATGGAAGGCTTGACCTCTGGTTTGGAACTTGGTCCAAAGCTCAATGGAGCCGAAGAGATAAAGGCAGAGCTCGAGAGATTGAAGAGGATGAGGGAACGGGAGAAATTGGCGGCGCATTTTCGACCCTCTGGTACAATTCTGGCCAATATGTCTTTGCCACGCTATCTAGCTGGAAATGGCTTACTCAGAGGAATGGCTATGACAAGTGAAATCCAGTCTCAGTTATCAAAGCGTAATGCTGTTACCATTGGTGGTAATTTAGCAGTGAATGGAGATGAAGGTGGTGGAGAAGCTACTGCTGTATTTAGGCATCAACTTTCAGAAGTTTCATCAATAGAGGTTGTTGCCTCAGCTGGTCTGCGTGCACTAATTGGGGTGCAGACAACTCGTAATTTGTCATCACACTCAGCTGCAACAATGGGCATTGCAATGTCTCTGAAAGATGGTTCATTGAGTCTTTCAAATTTATGGACCCGGCAACTGTCAGAAACAGCAAGTGGACATATAGAGCTTACTTTGGGACCACATTCATTTGTAGCTGTTGGGTGGCAAAAGAAAGATCAGAGAAGGTCTGCATCTGGAGAAGTGAAGTTTGACACAGGTTCCTTTGAGACAGAAGTTAATTATACTCATCGTTTTTCTCCTAAATCACTTGGCTGCATTGTGGGAAGAGTTGGGAGTTCTTCCCTTGAGATTGAAGTCGGTGGTGGGAGGAAGTTATCCAAATTCAGCTCAGTACGCTGGTTGTATATAATAGGAGTGCAGGGTATTTCCTGGAAATTCGAACTCTATCGTGGGGGTCAGAAGTTAATTATTCCTATTTTGCTGACAAGGCATCTGAACCCTGTGTTTGCTACTGGAGCATTTGTCGTTCCTGCATCTCTTTACTTTGTTCTAAAGGAACTTTTTATTAAACCTTATTACCTTAAAAGAAATAAGCAGAAGGCATTGGAGGAGGATGAGATAACTTCTGCTCAGGTTAAGGAAGCAAGGGCTGCAGCAGAGAAATCTCAGAAATTACAACAAAATGTGGCTAATAGGAAAAGAAACAAGCAATTAGAAACAGGTGGTCTGGTTATTATGAGAGCACTGTATGGAAATCAGAAAATTTTGAACAACTTAAAGTCATCAAGTGAAACAAGTTTTGAATCAACTTTAGAAATCGTTGATGTTACTGTACCCCTGAATTTTTTAATTAATGATTCCGGCCAACTCAAGCTTCATGAAGGTGTAAAAAAATCAGGCATCATGGGTTTCTATGATCCATGTCCTGGAAGTCCTAAAGAGTTGTATGTAGAGTATGTTTATGCTGGCAATCAATACAAGGTTTGGATTGGTGATTATGAAGAATTACAGATCCCTCAGGGCAGCCACAGGATATAA 1626 0.4225 MDEPSEAAQDNRELYALLNLSPEASDEEIRRAYRQWAQVYHPDKYQAPHMKDIATENFQRICEAYEILSDPNKRQIYDIYGMEGLTSGLELGPKLNGAEEIKAELERLKRMREREKLAAHFRPSGTILANMSLPRYLAGNGLLRGMAMTSEIQSQLSKRNAVTIGGNLAVNGDEGGGEATAVFRHQLSEVSSIEVVASAGLRALIGVQTTRNLSSHSAATMGIAMSLKDGSLSLSNLWTRQLSETASGHIELTLGPHSFVAVGWQKKDQRRSASGEVKFDTGSFETEVNYTHRFSPKSLGCIVGRVGSSSLEIEVGGGRKLSKFSSVRWLYIIGVQGISWKFELYRGGQKLIIPILLTRHLNPVFATGAFVVPASLYFVLKELFIKPYYLKRNKQKALEEDEITSAQVKEARAAAEKSQKLQQNVANRKRNKQLETGGLVIMRALYGNQKILNNLKSSSETSFESTLEIVDVTVPLNFLINDSGQLKLHEGVKKSGIMGFYDPCPGSPKELYVEYVYAGNQYKVWIGDYEELQIPQGSHRI 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1628 541 ProSiteProfiles dnaJ domain profile. 13 81 IPR001623 -
Aed11g1628 541 Coils Coil 411 431 - -
Aed11g1628 541 SMART dnaj_3 12 73 IPR001623 -
Aed11g1628 541 CDD DnaJ 13 70 IPR001623 -
Aed11g1628 541 Pfam DnaJ domain 14 78 IPR001623 -
Aed11g1628 541 PRINTS DnaJ domain signature 33 48 IPR001623 -
Aed11g1628 541 PRINTS DnaJ domain signature 73 92 IPR001623 -
Aed11g1628 541 PRINTS DnaJ domain signature 53 73 IPR001623 -
Aed11g1628 541 PRINTS DnaJ domain signature 15 33 IPR001623 -
Aed11g1628 541 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Aed11g1628 541 Coils Coil 95 118 - -
Aed11g1628 541 PANTHER CHAPERONE PROTEIN DNAJ 13 4 541 IPR042162 -
Aed11g1628 541 SUPERFAMILY Chaperone J-domain 10 84 IPR036869 -
Aed11g1628 541 Pfam DnaJ-like protein C11, C-terminal 387 535 IPR024586 -
Aed11g1628 541 Gene3D DnaJ domain 3 90 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1628 Aed-Chr11 20225309 20235270 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1628 5 80 C2H2 Transcription Factor Family AT1G74250 41.026 4.14e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1628 K09531 - gmx:100817782 985.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1628 11 20225309 20235270 Aed11g1628 11 20225309 20235270 ECH