Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1620 ATGCACACACAAGCAGGAGCATTGAGTGGAATAAGCCTGAGCTTCAACGGGTGGGCACTGAAAAAGAGAGGGCCGGTGTTTGTGTCCATGTTTAGCCCCATTAGTGCAGTTTGCTCTGTTATTTTCTCAGCAATTACCCTGGGAGAAACTATTAGTATTGGAAGTCTTGCAGGCATGTTTCTCATGTTCTTTGGACTCTACTTAGTTTTTTGGGCCAAAGGGAAAGAAGGACATTCAAATGGAGAAGGCTTAGTGAGTGAATATGATGCAGAGTCGCCTCTTTTATCCTAA 291 0.4399 MHTQAGALSGISLSFNGWALKKRGPVFVSMFSPISAVCSVIFSAITLGETISIGSLAGMFLMFFGLYLVFWAKGKEGHSNGEGLVSEYDAESPLLS 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1620 96 Gene3D - 3 76 - -
Aed11g1620 96 PANTHER WAT1-RELATED PROTEIN 3 85 IPR030184 GO:0016021|GO:0022857
Aed11g1620 96 Pfam EamA-like transporter family 14 70 IPR000620 GO:0016020|GO:0016021
Aed11g1620 96 PANTHER WAT1-RELATED PROTEIN 3 85 - -
Aed11g1620 96 SUPERFAMILY Multidrug resistance efflux transporter EmrE 5 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1620 Aed-Chr11 20175516 20175880 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1620 5 82 Nodulin-like Gene Family AT5G47470 69.231 7.93e-32 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1620 - - gmx:100784734 150.984