Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1604 ATGAATAGTAAATTTGGAGGGGAGAACAGCAGCTCCCTCAAATATCAAACAGCAGGCGTGACAAAAACGTGTAAAGAAGAGAAGCCCAATTATCAAATCGGGAGGCCCATACTAGGATTTCCAGTTGGCGCGGGTGAGGTAGAACCCTTCCACTGTGGTGGTGACGACTGCGCGATGGGTGCCTACAAGTATGTTTCAGAGCTATGGCGCAAGAAGCAGTCTGATGTCATGCGTTTCTTGCAGCGTGTGAGGTGCTGGGAGTATAGGCAGCAACCTTCAATTGTTCGTTTGACAAGGCCGACCCGCACTGACAAGGCTCATCGCTTGGGCTTTAAGCAAAAGCAGGGCTATGTGGTTTACCGTGTTCGTGTTCGGAGGGGTGGCCGAAAGAGGCCAGTTCCCAAAGGTATTGTCTATGGGAAGCCAACAAACCAGGGGGTTACCCAACTGAAATTTCAGCGTAGCAAGAGGTCAGTTGCTGAGGAGCGGGCTGGGCGGAAGCTGGGTGGACTTAGGGTGCTCAACTCTTACTGGGTTAATGAGGACTCTACTTATAAATACTTTGAGATAATTCTGGTGGATGTTGCTCATTCCGCTATTAGAAATGATCCCAGAATCAATTGGCTCGCTAATCCAGTGCACAAGCACAGGGAGCTTCGTGGGCTCACCTCTGCAGGGAAAAGCAACAGGGGTTTACGTGGCAGAGGACATCTCTACCACAAAGCACGTCCATCCCGCAGGGCTACCTGGAAGAGAAACAACACACTTTCTCTCCGCCGTTATCGCTGA 789 0.507 MNSKFGGENSSSLKYQTAGVTKTCKEEKPNYQIGRPILGFPVGAGEVEPFHCGGDDCAMGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLTRPTRTDKAHRLGFKQKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYFEIILVDVAHSAIRNDPRINWLANPVHKHRELRGLTSAGKSNRGLRGRGHLYHKARPSRRATWKRNNTLSLRRYR 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1604 262 MobiDBLite consensus disorder prediction 222 246 - -
Aed11g1604 262 Pfam Ribosomal L15 60 248 IPR000439 GO:0003735|GO:0005840|GO:0006412
Aed11g1604 262 Gene3D Ribosomal protein l15e 59 262 IPR024794 GO:0003735|GO:0005840
Aed11g1604 262 SMART Ribosomal_L15e_2 60 251 IPR000439 GO:0003735|GO:0005840|GO:0006412
Aed11g1604 262 PANTHER RIBOSOMAL PROTEIN L15 39 262 - -
Aed11g1604 262 PANTHER RIBOSOMAL PROTEIN L15 39 262 IPR000439 GO:0003735|GO:0005840|GO:0006412
Aed11g1604 262 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 58 253 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1604 Aed-Chr11 20085626 20087774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1604 59 262 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 89.216 8.31e-122 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1604 K02877 - gmx:100798324 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1604 11 20085626 20087774 Aed11g1604 11 20085626 20087774 ECH