Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1597 ATGACGGTTGAAAACGAAGATTTGGGTTTGAGTTTAAGCTTGAGTTTCCCTAAGAATAACAACTCAGCTGCTCTCAATCTCGCATCCTCTTCTCCTTCCACCCACAAGCCCTCTTGGAACCACACTTTCACTTCTTCAGGTGAAGCTGGATCATTCCTCCGCGGAATCGATGTGAACCGGTTACCTTCTGTGGTTGACTGCGAAGAGGAAGCAGGTGTTTCATCTCCAAACAGCACGGTTTCTAGCGTCAGTGGAAAACGTAGCAGCGACGAGAGGGAAGAACATGACACAGACACAAGAGGAGGCATCAGTGACGAAGAAGATGCCGAAACTTCTAGAAAGAAACTTAGACTCTCCAAAGACCAGTCAATTATTCTCGAAGAGAGCTTCAAAGAACACAACACTCTTAACCCCAAGCAAAAGTTGGCACTGGCGAAACAGCTGGGTCTTCGAGCGAGACAAGTGGAGGTGTGGTTCCAGAACAGAAGGGCAAGGACGAAGCTGAAACAAACGGAGGTTGACTGCGAGTTTTTGAAAAGGTGCTGCGAGAATCTGACGGAGGAGAACAGGAGGTTGCAGAAGGAAGTGCAAGAGCTTAGAGCACTCAAACTTTCCCCGCAGTTCTACATGCACATGACCCCACCCACCACCCTTACCATGTGTCCCTCCTGTGAGCGTGTCGCGGTTCCCCCTTCCGATCCTGCCACGCGTCACCATCCTCGGGCCTTTCCCATTGGCCCATGGGCCACCGCTGCCGCTCCTATTCCACACAGGCCCTTCGATGCCCTCCGTCCCAGATCTTGA 804 0.5149 MTVENEDLGLSLSLSFPKNNNSAALNLASSSPSTHKPSWNHTFTSSGEAGSFLRGIDVNRLPSVVDCEEEAGVSSPNSTVSSVSGKRSSDEREEHDTDTRGGISDEEDAETSRKKLRLSKDQSIILEESFKEHNTLNPKQKLALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSDPATRHHPRAFPIGPWATAAAPIPHRPFDALRPRS 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1597 267 MobiDBLite consensus disorder prediction 67 117 - -
Aed11g1597 267 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 2 257 - -
Aed11g1597 267 SMART halz 169 212 IPR003106 GO:0006355|GO:0043565
Aed11g1597 267 PRINTS Lambda-repressor HTH signature 149 165 IPR000047 GO:0003677
Aed11g1597 267 PRINTS Lambda-repressor HTH signature 140 149 IPR000047 GO:0003677
Aed11g1597 267 Pfam HD-ZIP protein N terminus 4 90 IPR006712 GO:0005634
Aed11g1597 267 SMART HOX_1 111 173 IPR001356 GO:0003677
Aed11g1597 267 Gene3D - 117 167 - -
Aed11g1597 267 CDD homeodomain 113 170 IPR001356 GO:0003677
Aed11g1597 267 Pfam Homeobox associated leucine zipper 169 203 IPR003106 GO:0006355|GO:0043565
Aed11g1597 267 Pfam Homeodomain 113 167 IPR001356 GO:0003677
Aed11g1597 267 CDD bZIP 162 201 - -
Aed11g1597 267 MobiDBLite consensus disorder prediction 86 117 - -
Aed11g1597 267 ProSiteProfiles 'Homeobox' domain profile. 109 169 IPR001356 GO:0003677
Aed11g1597 267 PANTHER - 2 257 - -
Aed11g1597 267 SUPERFAMILY Homeodomain-like 104 170 IPR009057 -
Aed11g1597 267 Coils Coil 168 205 - -
Aed11g1597 267 ProSitePatterns 'Homeobox' domain signature. 144 167 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1597 Aed-Chr11 20040114 20041899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1597 1 267 Homeobox Transcription Factor Family AT4G16780 65.636 1.54e-112 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aed11g1597 HD-ZIP_N 2.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1597 K09338 - gmx:100783851 426.017