Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1593 ATGGCAAACGATCTTGAACTTTCTGCTCTCAATCGCATCAAACTGCATCTTCTCGGAGAACTCTCTCCCCAAAACACCAACTTCTCTTTTCAATTTCAGGAACCAAACCCAACCTCTGACCAAATCTTCTCTGAATTCTTCCTCGATTTCCCAACCCCGAAACCACGGTTGGAAATGGAATTCACACAGGAGGACCGTAAGAAACCTCGAAAGCCGTCTTTGCAAATCTCCCTCCCCAAGAACACCGAGTGGATCCAGTTCCAAACGGTGTCGCAGACGCAGACGCAGACTACAGAGAAGAAGCACTACAGAGGTGTGCGACAGAGACCGTGGGGGAAGTTCGCCGCGGAGATCAGAGACCCCAACAAGCGCGGCTCCAGGGTGTGGCTCGGGACGTTCGACAAGGCTATTGAAGCCGCCAAAGCCTACGACCGAGCCGCCTTCAGGCTTCGCGGTTCCAAAGCCATCCTCAACTTCCCCCTCGAAGCCGGCGCGGATGACCGCAAACGCCAAAGGGAAGAAGAGGAGGCGGAAGTCGTCAAGAGGGTAAAGATAGAGGAATCCGCCGTTAGCCGTATTAAGAATACTCCGTTGACGCCGTCTAGCTGGTTAGGCTTCTGTGCTACTGATGCAAACGATATCTTCGCCATGCCGCCCTTGTCGCCGTTATCTCCCCACCCCTCCTTGGGTTATCCACAGCTTATGGTTGTGTGA 714 0.535 MANDLELSALNRIKLHLLGELSPQNTNFSFQFQEPNPTSDQIFSEFFLDFPTPKPRLEMEFTQEDRKKPRKPSLQISLPKNTEWIQFQTVSQTQTQTTEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDKAIEAAKAYDRAAFRLRGSKAILNFPLEAGADDRKRQREEEEAEVVKRVKIEESAVSRIKNTPLTPSSWLGFCATDANDIFAMPPLSPLSPHPSLGYPQLMVV 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1593 237 SUPERFAMILY DNA-binding domain 102 161 IPR016177 GO:0003677
Aed11g1593 237 ProSiteProfiles AP2/ERF domain profile. 102 160 IPR001471 GO:0003700|GO:0006355
Aed11g1593 237 PRINTS Ethylene responsive element binding protein signature 103 114 IPR001471 GO:0003700|GO:0006355
Aed11g1593 237 PRINTS Ethylene responsive element binding protein signature 142 162 IPR001471 GO:0003700|GO:0006355
Aed11g1593 237 Pfam AP2 domain 102 152 IPR001471 GO:0003700|GO:0006355
Aed11g1593 237 Gene3D AP2/ERF domain 101 162 IPR036955 GO:0003700|GO:0006355
Aed11g1593 237 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 3 222 - -
Aed11g1593 237 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 3 222 - -
Aed11g1593 237 SMART rav1_2 102 166 IPR001471 GO:0003700|GO:0006355
Aed11g1593 237 CDD AP2 101 160 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1593 Aed-Chr11 20016538 20017251 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1593 60 237 AP2-EREBP Transcription Factor Family AT5G47230 57.216 9.48e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed11g1593 AP2 3.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1593 K09286 - gmx:100800788 308.531