Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1592 ATGTATGAACAAAGTAGCTACCAGTCCGATTTGTCCCTTTTGGACTCCATTCGTCGCCACTTACTCGGCGACTCCGAGGAACACAAATCTGGAGCCCCGAATGTTAATTCGGGTAACACTCCAGTGTACTCTCGGAGCTCCAGTTTCAGCAGGTTGTACCCTTGCTTGAGTAACGATTGGGGTGAACTTCCTCTTAAGGAAGATGATTCAGAGGACATGCTTCTCTACGGTGTTCTTCGCGACGCCACGAACGTAGGGTGGGTCCCATCTCTCGACGCAGTCTTAACGGAGAGTTTCTCGTCTGGTTTTCCGGCAGTGACAGTGAAACCCGAACCGGTTATATTTTCGGCACCGGAGCTTGTCTTTATTCCTCCGGTGGTTCCGAAGGCGGAGCCTGCGGCGGTTCCGGCGAAGGGGAAGCACTACCGCGGCGTGCGGCAGCGGCCGTGGGGGAAATTCGCGGCAGAGATCCGTGACCCGGCTAAAAACGGGGCTCGGGTTTGGCTCGGAACGTTCGAAACGGCTGAGGATGCCGCGCTGGCTTACGATCACGCCGCGTACCGAATGCGGGGCTCGCGGGCCTTGTTGAATTTCCCGCTTCGGATTAATTCTGGCGAGCCCGAACCGGTTCGTGTGACGGCAAAGAGGTCGTCGCCGGAGCCGTCGTCTTCGTCGGAGAGTGCGTCTTCGGCCAAGAGGAGGAAGAAGGTGGTGGGGTCCACGTCAACGGTGATGGCTCAAAGTGGGTTGAAAACGGGGCAAGTGGCACAGTGCACACGTGGAGAGCAGTTGTTGGTGAACTAA 804 0.5697 MYEQSSYQSDLSLLDSIRRHLLGDSEEHKSGAPNVNSGNTPVYSRSSSFSRLYPCLSNDWGELPLKEDDSEDMLLYGVLRDATNVGWVPSLDAVLTESFSSGFPAVTVKPEPVIFSAPELVFIPPVVPKAEPAAVPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDHAAYRMRGSRALLNFPLRINSGEPEPVRVTAKRSSPEPSSSSESASSAKRRKKVVGSTSTVMAQSGLKTGQVAQCTRGEQLLVN 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1592 267 Gene3D AP2/ERF domain 140 202 IPR036955 GO:0003700|GO:0006355
Aed11g1592 267 PANTHER DNA-BINDING DOMAIN 26 240 IPR044808 GO:0003700|GO:0009873
Aed11g1592 267 CDD AP2 140 199 IPR001471 GO:0003700|GO:0006355
Aed11g1592 267 Pfam AP2 domain 141 191 IPR001471 GO:0003700|GO:0006355
Aed11g1592 267 SMART rav1_2 141 205 IPR001471 GO:0003700|GO:0006355
Aed11g1592 267 PRINTS Ethylene responsive element binding protein signature 165 181 IPR001471 GO:0003700|GO:0006355
Aed11g1592 267 PRINTS Ethylene responsive element binding protein signature 142 153 IPR001471 GO:0003700|GO:0006355
Aed11g1592 267 PANTHER BNAANNG21280D PROTEIN 26 240 - -
Aed11g1592 267 SUPERFAMILY DNA-binding domain 141 201 IPR016177 GO:0003677
Aed11g1592 267 MobiDBLite consensus disorder prediction 206 244 - -
Aed11g1592 267 MobiDBLite consensus disorder prediction 216 244 - -
Aed11g1592 267 ProSiteProfiles AP2/ERF domain profile. 141 199 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1592 Aed-Chr11 20007670 20008473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1592 1 266 AP2-EREBP Transcription Factor Family AT4G17500 55.674 5.42e-86 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed11g1592 AP2 3.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1592 K09286 - gmx:100819649 361.303