Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1589 ATGTTGGTAAAATGGAATGGTTCTGATGGAGTAATTCCACAATCGCAAACCTTCTTCTTCTGTTCAAGACCTCAAAAACGTAGACGAAAGGACTCTGTTCAAAATGAAAAGCGCATCAATGTTAAATTCCTGGAGTTGAACTCACCAGAAGGCATACAGAATGGGTTTCTACAAAAAGATAATGACATCCTATCCTGCAAAGTGGAGAACGTGTCTAGAACATCTGGTAATGAGAAGACTTTTCCCAGTGGAAGAAATGATGAAGGGAAATTTGGTCCTGATCATCCTGGCACCATGGATGACCTGGAGCATGTTGAATCCAGTTTCAACATTCCAGGTGTCTCAATTGCCATGCCCCAATCTTCTGTAGACCCTGAGTGTAGTAAATCAATATGTAAAAGTGATCATGCTCTGCCTGCTAAAACAAAGAAGTTAAGCATGGATCGATCAGACTCAAGAAACCGAATGCTTCTGCAGAAGAGACTGTTCTTTCACTCGCACAGAGTCCAGGCTATGGCACTAGAACAAGTGTTAACAGACCGTGATAGTGAAGATGAAGTGGATGACGACATTGCAGATCTTGAAGATAGAAGGATGCTTGATGATTTTGTGGATGTTTCCAAAGATGAAAAACAGCTCATGCATCTCTGGAACTCTTTTATGAGGAAGCAAAGGGTGCTGGCAGATGGTCATGTTCCGTGGGCCTGTGAGGCATTTTCCAAGCTTCATGGAAAAGAGCTAATCTCATCTCCAGCTTTATTTTGCTCCTTTCGTTGTATGCATTTTGATGGATTCGATCCCAAACCTTCAGGCTCAGGGCATCAATTCCCAATCCCAGGTTCCCAGTTCGTGGTCCTCGTTTTCGTGCCCTTCTGGTTCGTATCAATTACTTATCAAAACTTTAAATATTTAAATAGCAAAGCTCCCAAACCTTCAAAGGTACCTCCTTTTGATCTCTGCGTTTTGTGGGTATGTCTCTCAGAGCCTCCTGATGTTGGGAATTGGTTCTCAAGCTATGAATATCGATCACTCAGTCCTGATTCGAATTTTAGTGTCGAAGATTCTGTTTTCGCGGAAGAAGAAACCCACAGAGATGGTGAAGAAGAAGAAGAAGAAGAAGAAGAAAATGTTAGGGTTCAACTTGAAGGGGTTGCCGGAGAGAAGGTAGTCCAATGTAGCAGAACTTGTGCTGAAGAGGATAATCATAACGAAGACCAGTGCTTGAATAAGAATCCTGAGGCATTCAGCTCATGCTCACTCCTTTCTGAGCCTCCAGACATAAGAAACTGGTTTTCGAGCTATGTTTACGAGTCACCCGAGTTTGATACAAGTAATCTTTTTAGAGATGAAGTTCCTGAAGAGAATGAGTGTAGGAAGGAGAGGCTTGATTTTGAAGTTTTGAAAGAAAATGAAAGCAGGTCTGATAATGTCCTCCCGGAAGAGTGTGTTGAGCACAATGACTCTTCTAATAAAAACACAAAGGGCGATGATAGTGCAGAAATGAAGAAAAATTCAACTACTGTTGATACTTGTCATCTGGAAAAGATTTTGCAGCCATGCATGCAAGATAAGACACTGCAACATAATCTTGGTCCAAGCAAGTACAAGGAGACATTGAACCTTAATCACAAAAGTCCCGGCTGTGATCGAGAGGGACATCCAAAGTCACTGGACAATGATAGAAGTTCAGTGAGACCTCCAAAGCTGCTACAAAAGAATGATTCCATTGAATCAAAATCAAAAGCTGAAATCCAACATGACAACAAGCTTGACTTGAGTGCTGCAAGTTTAGCTAAAACCTTCTCAACAAGAAGTTCAACTTGTACAAGCAATAAAGAGAATGATGGTTTTGTGACAACAAGGAAGAACAGATGCTGCACCGGAGGAAGTGATGAAAATTCTTGGAAGAAATCAGAAAAGATATTATTAGAGCGTTCAACAAAGAGAAAGGCATTAACAGAAGCAACAAATCTTCAACAATATAATGTCGTGGGAATAACAGGGAAATGGCAATGCCCTCAGAAACGTAAACCTGATGTTGGACCTGCTATGAAACAACTTAGGCTTGAACGCTGGATAGTGCGTAGGAGGAGGAGCAGGAAGAAGCGAAGCGAAAGGAAAGCAATGGCTTCAGCTAAAATAAAAAGGTGGCTTCCGCTCGAAGCAAATCCTGATATCATGAATCAGTTCCTTTGGGGGCTTGGGCTTCCAGAGAATCAGGCTGAATGCTGTGACGTTTACGGCTTAGACGAAGAGCTTCTGGAAATGGTTCCAAAGCCCGTTCTCGCCGTGCTTTTTCTCTATCCCATAACCACTCAGACTGAAGAAGAGAGGTTGCAGCGGGACAATGAAAATAAGGAATATAACAGCAAAGTGTATTTTATGAAGCAAACCGTGGGAAATGCTTGTGGGACAATTGGACTGCTTCATGCACTTGGCAACTTGACTTCTGAAGTCAAGCTCGTTGATGGGTCGTTCTTTGATAAATTTTTTAAATCTACTGCAAGCATGGATCCATCGCAGCGTGCAACCTTTCTTGAGAATGACACAGAAATGGAAGTAGCTCATTCTGTGGCAGCAACTGCTGGTGAGACAGAGGCATCAGACAATGCAAATGCACATTTCATATGCTTTTCCTGTGTGGATGATGAAATTTATGAGCTTGATGGAAGAAAGTCAGCACCAATATCTCATGGTTCATCTTCACCGAGTACTTTGTTAAAGGATGCAACTAAAGTAATACAGAGCATGATCCAGAAAAATCCAGAATCTATCAACTTCAATGTCATTGCCTTCTGTAAGAAATCTGGATAG 2814 0.4179 MLVKWNGSDGVIPQSQTFFFCSRPQKRRRKDSVQNEKRINVKFLELNSPEGIQNGFLQKDNDILSCKVENVSRTSGNEKTFPSGRNDEGKFGPDHPGTMDDLEHVESSFNIPGVSIAMPQSSVDPECSKSICKSDHALPAKTKKLSMDRSDSRNRMLLQKRLFFHSHRVQAMALEQVLTDRDSEDEVDDDIADLEDRRMLDDFVDVSKDEKQLMHLWNSFMRKQRVLADGHVPWACEAFSKLHGKELISSPALFCSFRCMHFDGFDPKPSGSGHQFPIPGSQFVVLVFVPFWFVSITYQNFKYLNSKAPKPSKVPPFDLCVLWVCLSEPPDVGNWFSSYEYRSLSPDSNFSVEDSVFAEEETHRDGEEEEEEEEENVRVQLEGVAGEKVVQCSRTCAEEDNHNEDQCLNKNPEAFSSCSLLSEPPDIRNWFSSYVYESPEFDTSNLFRDEVPEENECRKERLDFEVLKENESRSDNVLPEECVEHNDSSNKNTKGDDSAEMKKNSTTVDTCHLEKILQPCMQDKTLQHNLGPSKYKETLNLNHKSPGCDREGHPKSLDNDRSSVRPPKLLQKNDSIESKSKAEIQHDNKLDLSAASLAKTFSTRSSTCTSNKENDGFVTTRKNRCCTGGSDENSWKKSEKILLERSTKRKALTEATNLQQYNVVGITGKWQCPQKRKPDVGPAMKQLRLERWIVRRRRSRKKRSERKAMASAKIKRWLPLEANPDIMNQFLWGLGLPENQAECCDVYGLDEELLEMVPKPVLAVLFLYPITTQTEEERLQRDNENKEYNSKVYFMKQTVGNACGTIGLLHALGNLTSEVKLVDGSFFDKFFKSTASMDPSQRATFLENDTEMEVAHSVAATAGETEASDNANAHFICFSCVDDEIYELDGRKSAPISHGSSSPSTLLKDATKVIQSMIQKNPESINFNVIAFCKKSG 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1589 937 MobiDBLite consensus disorder prediction 543 584 - -
Aed11g1589 937 Pfam VEFS-Box of polycomb protein 145 260 IPR019135 -
Aed11g1589 937 MobiDBLite consensus disorder prediction 470 506 - -
Aed11g1589 937 Pfam Ubiquitin carboxyl-terminal hydrolase, family 1 717 918 IPR001578 GO:0004843|GO:0006511
Aed11g1589 937 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 713 935 IPR001578 GO:0004843|GO:0006511
Aed11g1589 937 SUPERFAMILY Cysteine proteinases 715 935 IPR038765 -
Aed11g1589 937 Gene3D - 711 935 IPR036959 GO:0004843|GO:0006511
Aed11g1589 937 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 869 880 IPR001578 GO:0004843|GO:0006511
Aed11g1589 937 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 885 895 IPR001578 GO:0004843|GO:0006511
Aed11g1589 937 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 797 814 IPR001578 GO:0004843|GO:0006511
Aed11g1589 937 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 757 769 IPR001578 GO:0004843|GO:0006511
Aed11g1589 937 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 719 736 IPR001578 GO:0004843|GO:0006511
Aed11g1589 937 MobiDBLite consensus disorder prediction 536 584 - -
Aed11g1589 937 CDD Peptidase_C12_UCH_L1_L3 717 932 - -
Aed11g1589 937 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 713 935 - -
Aed11g1589 937 MobiDBLite consensus disorder prediction 357 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1589 Aed-Chr11 19986550 19999088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1589 1 258 C2H2 Transcription Factor Family AT5G51230 49.807 2.31e-50 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1589 K05609 - gmx:102668205 542.732