Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1568 ATGAATTGTTTTTTCTTCAAAAACAAAACAAAATCGGACTCAGAATTACCAAAGCGAAGGAAGAAGAAGAAAAATCAGGTGGGTAATGGAGCAACCAGGTCCCCCAGCTCGGTACCATCGCCAAAGAGCATAAAAGAATTGTACAAAGAGAAAGAGCACAATTTCAGAATCTTCACTTTGCTAGAGCTGGTAGATGCAACTAATGGTTTCAATAGAATGCTCAAGATTGGAGAAGGAGGTTTTGGGAAAGTATATAGGGGAACAATTAAACATGAAGGTGATCCTATTGTGGTCGCAATAAAAAAACTTAACACTCGTGGCTTACAGGGGCATAAAGAATGGCTTGCAGAAGTTCAATTTCTCAGCGTTGTAAACCACCCGAATTTGGTTAAGCTTCTGGGATACTGCTCTGTAGATAGTGAAAAGGGGATCCAACGGTTGTTGGTGTATGAGTTCATGTCTAACAGGAGTCTGGAAGATCATCTTTTTAGTCTTTCTTTACCTCATTTGCCTTGGAAAACAAGATTGCAAATCATGCTCGGTGCTGCTCAGGGATTACATTATCTACACAATGGATTGGAGGTTAAGGTAGTGGGGACACAGGGATATGCTGCCCCAGAGTATGTTGAAACAGGTCATCTAAAAATGGAGAGTGACATATGGAGTTTCGGTGTGGTACTTTATGAGATACTCACGGGAAGACGTTCATTGAATAGAAACCGTCCAATAGGGGAACAAAAGCTTATAGAGTGGGTTAAAAATTACCCTGCTAACAGTAGAAGTACCAGATTCAGCACCATCATTGACCCTCATCTCAAGAACCAATATTCTCTTGCTGCAGCTCGCAAAGTAGCCAAGTTGGCCGATACATGCTTGAAGAAGAATCCTCAAGATAGACCATCCATGGCTCAGATAGTGGAAACCTTGAACCAAGCATTGCAGGATTCAGAATGA 954 0.4151 MNCFFFKNKTKSDSELPKRRKKKKNQVGNGATRSPSSVPSPKSIKELYKEKEHNFRIFTLLELVDATNGFNRMLKIGEGGFGKVYRGTIKHEGDPIVVAIKKLNTRGLQGHKEWLAEVQFLSVVNHPNLVKLLGYCSVDSEKGIQRLLVYEFMSNRSLEDHLFSLSLPHLPWKTRLQIMLGAAQGLHYLHNGLEVKVVGTQGYAAPEYVETGHLKMESDIWSFGVVLYEILTGRRSLNRNRPIGEQKLIEWVKNYPANSRSTRFSTIIDPHLKNQYSLAAARKVAKLADTCLKKNPQDRPSMAQIVETLNQALQDSE 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1568 317 MobiDBLite consensus disorder prediction 1 42 - -
Aed11g1568 317 PANTHER OS01G0588500 PROTEIN-RELATED 8 198 - -
Aed11g1568 317 PANTHER OS01G0588500 PROTEIN-RELATED 197 315 - -
Aed11g1568 317 ProSitePatterns Protein kinases ATP-binding region signature. 76 102 IPR017441 GO:0005524
Aed11g1568 317 PANTHER RECEPTOR-LIKE KINASE PLANT 197 315 - -
Aed11g1568 317 ProSiteProfiles Protein kinase domain profile. 70 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1568 317 PANTHER RECEPTOR-LIKE KINASE PLANT 8 198 - -
Aed11g1568 317 Gene3D Transferase(Phosphotransferase) domain 1 196 317 - -
Aed11g1568 317 Gene3D Transferase(Phosphotransferase) domain 1 153 195 - -
Aed11g1568 317 SUPERFAMILY Protein kinase-like (PK-like) 52 309 IPR011009 -
Aed11g1568 317 Pfam Protein kinase domain 196 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1568 317 Gene3D Phosphorylase Kinase; domain 1 49 152 - -
Aed11g1568 317 Pfam Protein tyrosine and serine/threonine kinase 75 191 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1568 Aed-Chr11 19861690 19864513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1568 1 309 Glycoside Hydrolase AT3G07070 36.464 1.17e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aed11g1568 Pkinase 1.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1568 - K00924 gmx:100782248 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1568 11 19861690 19864513 Aed11g1568 11 19861690 19864513 ECH
Aed11g1568 11 19861690 19864513 Aed6g0617 6 5240725 5251029 PCT