Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1561 ATGAAAATGCCACCAGAAAACAAGAGGGAAAAGTATGTTACACTCCTTGATCATCATCTAGTTGAAATAAATTCCAAGGCAGTGGTAAAAGAGGAAAATCTTGTGGCAAGGCCTTTGGATGTATCTCGTTCTATATATAAGTTGAAAGGAGATTTTAATAGTTTGCAGGTCTCATCAGACAGGAATGTAGTAACAGGTCTGATGGCTAAATCAGCATGGCCTTGGAGGTCTGACTCTGACAAAGGTTCTTCCGAATTTAATTTGGGTGATGCTAAAAGTGAAGACAAGAGAAAGAAAGTGGTTTCTTTTGCATTGCCTGAGAGGTCTAGAAGAGCTATCAAGACTAAAGGTCATTTTTGGCAGAAGCCTTTGAAAAAGAAGGGAAATGCTGCTTCTTCTGAAGGAATGGGTGAATTAGAAATTTGGGAAAAGGATGATTGTCTTGACGATAATGAAATTAGTAAAGACCTTCAAATTTTTCTGAAATCACATGAGATTGATGTAAATGTTACTCCCTCTTCTCGCTCTAATTTGACTGGTGATAAGAATGACTCAAATGTGGCCCGAAAAAAAGTGAGGGAGACATTACAGTTGTTTCAAGTTGTTTCTAGAAAGCTTTTACAGGAAGCAGAATCAAAGTTAAATGAGCCAGGAAGTAGAAAAAGGGTTGATTTAACTGCTGCAAGGTTCCTTAAGAAGAATGGGAATGATGTTAACTCAGGCAAGCAGATACTGGGCCATGTCCCTGGGGTTGAAGTTGGTGATGAATTTCAATATAGGGTGGAGCTTAATATAATTGGCCTTCATCGTCAGATTCAGGGTGGCATAGATTATGTGAAGCACAATGGTAAGATCCTTGCGACTAGCATTGTTGCTTCAGGGGGCTATGCTGATTATTTGGTCAATTCGGATGTCTTGATATACACGGGGCAGGGTGGGAATGTGATGAACACTAGTAAAAAACCTTTAGATCAGAAGCTTGAGAGGGGCAATCTTGCTTTGAAGAACAGCAGTGAGGAGAAGAATCCAGTTAGGGTGATTCGTGGCTCTGAAACAATGGATGAAAAGTACAAGACATATGTTTATGATGGACTGTATGTAGTTGAGTCATATTGGCAAGACAGGGGATCACATGGGAAGCTGGTTTATAAGTTTCGCCTGCAAAGAATTTCTTGTCAAAATCTTGCTTTGAAGGAAGTGAAGAAATCTAACTAG 1215 0.3959 MKMPPENKREKYVTLLDHHLVEINSKAVVKEENLVARPLDVSRSIYKLKGDFNSLQVSSDRNVVTGLMAKSAWPWRSDSDKGSSEFNLGDAKSEDKRKKVVSFALPERSRRAIKTKGHFWQKPLKKKGNAASSEGMGELEIWEKDDCLDDNEISKDLQIFLKSHEIDVNVTPSSRSNLTGDKNDSNVARKKVRETLQLFQVVSRKLLQEAESKLNEPGSRKRVDLTAARFLKKNGNDVNSGKQILGHVPGVEVGDEFQYRVELNIIGLHRQIQGGIDYVKHNGKILATSIVASGGYADYLVNSDVLIYTGQGGNVMNTSKKPLDQKLERGNLALKNSSEEKNPVRVIRGSETMDEKYKTYVYDGLYVVESYWQDRGSHGKLVYKFRLQRISCQNLALKEVKKSN 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1561 404 ProSiteProfiles YDG domain profile. 246 389 IPR003105 -
Aed11g1561 404 Gene3D - 229 404 IPR036987 -
Aed11g1561 404 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 120 403 - -
Aed11g1561 404 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6 120 403 - -
Aed11g1561 404 SUPERFAMILY PUA domain-like 228 394 IPR015947 -
Aed11g1561 404 SMART G9a_1 241 393 IPR003105 -
Aed11g1561 404 Pfam SAD/SRA domain 245 391 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1561 Aed-Chr11 19736900 19738952 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1561 186 397 Su(var)3-9 homologs AT5G04940 41.204 3.22e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1561 K11420 - gmx:100783959 537.724