Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1537 ATGGGTAGCAATGGACTGTGCAACCTGTTTTCTTGCTTGAAAGCCTCCTCCGACCATGACCATGACCATAACAATAACCATAACCAAAAGCAGTTGGTGTTTGCAGAGACGGAGGCATTGGACGAAACCCTAGGCCACTCTTTCTGCTACGTTAGATCCTCCGCTCGTTTTCTCTCTCCCTCCCATTCCGATCGCATCATCTCTCCCTCCAACTCCCCCTCCCACCGCCCCGATTTCCCCGAAACCGCATTCAAGGCCATTTCCGGCGCCTCCGTCAGTGCCAACAGCTCCGTCCCCAAAGCCGTTATCCAGACCACCGACGACGACGACGACGGCGGCGGCGGTGAAGACACCACCGTCAATGGCTTCAAAGGAACGTCGTCGTTTAGCGCCCTCCCTCTCCAGCCCGCGCCAAGAGGAGCAGGAGTAGCTGAAGAGAGAGAGAGGCGGGCTTTGTTCCTCTCGGGGCCAATTGAGAGCGGCGCGCTCTCCGGACCCCTCGACGACGCCGTTTCGAGCTCGGCGGGAGTTCCTTTCTCTGCTCCGCTGGGGGGTGGGGTGTATGTGAAGAAGAAGCGGAAGAAGAGCATTGCGGAGTTGAGAAAAGCCTTCCAGAGGAGTCTCTCCGAGAAGAAGCGCCCCTGGGTGGTGCCCGTGGGAAGGAAGGGGAAGAGCGAGAGCAATGTGCAGTGGGCGCTGGGAAAAGCAGGGGAGGATCGTGTGCATGTGGTTGTATCGGAAGAACAGGGTTGGTTGTTCGTTGGAATTTACGACGGTTTCAATGGCCCCGACGCGCCTGAGTTTCTCATGGGTAATCTCTACCGCGCCCTTCACAAAGAGCTGCAGGGTTTGTTTTGGGAACTTGAAGAGTCGCAGCTGCAGGGAACTGACCCTGCACCTGCGGTGGAGGTTCAAGAAGAGTCTAATTCTCTCCAAGGAGGATCGGTTAAGAGAGTGACGTTTCAAGCGGAGGGGAGTGAGAGTAGGAGGAGAAGGTTGTGGGAGTTTCTGGCTGAGGAGGATGATGATGCTGAGGACGGCCTTGATCTTTCCGGCTCGGATAGGTTTGCGTTTTCGGTCGGCAAGGAGGCTTCGGGAGGCAGTAGACGCTGGTTGATTTTGTCTAAGTTGAAGCATGGCTTGTCCAGGCATAGGGAGGGTCATGGGAGGAGCTTGTTGCCGTGGAGTTTGGCTGTGGGAGCGGAGAAGGTCAAGGAGGAAAATCCAGCAGCGGTGGAGCCAGAGGAGGAAAAGGACCGCGGTGGGAGAAAACGGAAGGTGGGACCTGTGGATCATGAGTTGGTTTTGAGGGCATTGTCTCGGGCGCTTGAGATGACTGAGCTTGCATATTTGGACATGACGGATAAGCTTATTGATACCAACCCAGAGCTTGCTTTGATGGGGTCATGTTTGTTGGTTGTGTTGATGAGGGATTATGATGTTTATGTGATGAATGTTGGGGATAGCCGTGCCATTGTGGCGCATTATGAGTGTAACGAATCCGGAGGTGGTACAGATGTTGTTGAGTCTAGTGGGGAGTGCATAGTGGAGGAGAACTTGGCTCCGGAAAGGAGGCTGGTTGCATTGCAGCTCTCCACTGACCACAGCACCAGCATTGAAGAGGCAAGTTTCGATTCTTTCTACATTTTATGCACCTCCATTCAGAAGCAACAGATCTTTGGCTCCATGCTTATTTGCTGTTTCCTTTTAATTATTTATTTTACAAGTTCTGCTACTACTAATTATGTCTCCTTTTCCTTCTGTCATGTTCTGATCAATTCTTTCACCACATCTCTGAAATTAAAGTTTATTCTTTTGCAGGAGGTTGTTAGGATTAAGAATGAACATCCTGATGATAACCAATGTATTGTAAATGATAGAGTAAAAGGCCGTCTTAAGGTTACTAGAGCTTTTGGAGCTGGATTTTTGAAACAGCCGAAGTGGAATGATGTAGTACTAGAAATGTTTCGAAATGAATATATTGGCACTGCTCCATATATATCCTGCTGCCCTTCATTACGTCACCATAGATTATGCCCGAGAGATCAGTTCTTGATCCTCTTGTCTGATGGGTTATATCAATATCTTAGCAATCAAGAAGTGGTTTCTGAAGTTGAGAGTTTCATGGAAAAGTTTCCAGATGGAGATCCTGCCCAGCATTTAATAGAGGAGTTGCTCCTACGTGCAGCGAAAAAGGCTGGAATGGATTTCCACGAGTTGCTGGATATCCCTCAAGGAGATAGGAGGAAGTACCATGATGATGTTACCGTTATGGTGATATCACTTGAAGGAAGAATCTGGAAATCATCAGGGAAGTATCCGTGA 2325 0.5015 MGSNGLCNLFSCLKASSDHDHDHNNNHNQKQLVFAETEALDETLGHSFCYVRSSARFLSPSHSDRIISPSNSPSHRPDFPETAFKAISGASVSANSSVPKAVIQTTDDDDDGGGGEDTTVNGFKGTSSFSALPLQPAPRGAGVAEERERRALFLSGPIESGALSGPLDDAVSSSAGVPFSAPLGGGVYVKKKRKKSIAELRKAFQRSLSEKKRPWVVPVGRKGKSESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGNLYRALHKELQGLFWELEESQLQGTDPAPAVEVQEESNSLQGGSVKRVTFQAEGSESRRRRLWEFLAEEDDDAEDGLDLSGSDRFAFSVGKEASGGSRRWLILSKLKHGLSRHREGHGRSLLPWSLAVGAEKVKEENPAAVEPEEEKDRGGRKRKVGPVDHELVLRALSRALEMTELAYLDMTDKLIDTNPELALMGSCLLVVLMRDYDVYVMNVGDSRAIVAHYECNESGGGTDVVESSGECIVEENLAPERRLVALQLSTDHSTSIEEASFDSFYILCTSIQKQQIFGSMLICCFLLIIYFTSSATTNYVSFSFCHVLINSFTTSLKLKFILLQEVVRIKNEHPDDNQCIVNDRVKGRLKVTRAFGAGFLKQPKWNDVVLEMFRNEYIGTAPYISCCPSLRHHRLCPRDQFLILLSDGLYQYLSNQEVVSEVESFMEKFPDGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYP 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1537 774 Pfam Protein phosphatase 2C 606 730 IPR001932 -
Aed11g1537 774 Gene3D - 601 769 IPR036457 -
Aed11g1537 774 PANTHER PROTEIN PHOSPHATASE 2C 26 541 IPR015655 GO:0004722|GO:0006470
Aed11g1537 774 CDD PP2Cc 431 762 IPR001932 -
Aed11g1537 774 MobiDBLite consensus disorder prediction 404 426 - -
Aed11g1537 774 PANTHER PROTEIN PHOSPHATASE 2C 607 772 IPR015655 GO:0004722|GO:0006470
Aed11g1537 774 SUPERFAMILY PP2C-like 234 763 IPR036457 -
Aed11g1537 774 SMART PP2C_4 222 760 IPR001932 -
Aed11g1537 774 Gene3D - 201 543 IPR036457 -
Aed11g1537 774 ProSiteProfiles PPM-type phosphatase domain profile. 221 762 IPR001932 -
Aed11g1537 774 MobiDBLite consensus disorder prediction 406 426 - -
Aed11g1537 774 PANTHER PROTEIN PHOSPHATASE 2C 29 607 772 - -
Aed11g1537 774 PANTHER PROTEIN PHOSPHATASE 2C 29 26 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1537 Aed-Chr11 19596125 19600710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1537 1 773 PP2C-type Phosphatase Gene Family AT2G35350 51.704 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1537 - - qlo:115971264 841.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1537 11 19596125 19600710 Aed6g0651 6 5558619 5563891 PCT