Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1529 ATGGCTGGTTTGGATTTAGGCTTCGTCCAAAGTCTCCACACACCACCAGCTGACTTCAACCAACACCAATCCAACGAGGAAGATGGGCCCCATCAGGCCGACATGGCGGGACGGCGACCGCGGGGGCGTCCGGCTGGGTCGAAGAACAAGCCGAAGCCGCCGGTCATCATTACGCGGGAGAGCGCCAACACGCTCCGCGCCCACATCCTCGAAGTCGCCAGCGGCTGCGACGTCTTCGAAAGCGTTGCCAGCTACGCGCGCCGCCGCCAGCGCGGGATCTGTATTCTCAGCGGCAGCGGAACAGTCACTAATGTGAGGCTGCGGCAGCCGGCCTCGGCGGGGGCGGTGGTCACGCTTCACGGCAGGTTCGAGATACTGTCCCTGGCGGGATCGTTTCTTCCTCCTCCAGCGCCGCCCGGTGCGACCAGCCTGAGCATATACCTCGCCGGGGGACAGGGGCAGGTGGTTGGTGGGAGTGTGGTCGGAGAGTTGACCGCGGCGGGGCCGGTGATTGTGATGGCAGCGTCGTTCACCAACGTGGCTTACGAGAGATTACCGTTAGAGGAAGAAGAAGAACAGGTTCAGATATCTGGTGGTGCTGGTAACAATAATAATAATAATAATAATAACCCCTTTCCTGATCCATCTTCGGGACTTCCTTTCTTCAATTTGCCAATGAATAATGTTCAGTTGCCTGTGGATGCCTGGGCGGGAAACTCAACTACATCTACACGTTCACCATTTTGA 747 0.5823 MAGLDLGFVQSLHTPPADFNQHQSNEEDGPHQADMAGRRPRGRPAGSKNKPKPPVIITRESANTLRAHILEVASGCDVFESVASYARRRQRGICILSGSGTVTNVRLRQPASAGAVVTLHGRFEILSLAGSFLPPPAPPGATSLSIYLAGGQGQVVGGSVVGELTAAGPVIVMAASFTNVAYERLPLEEEEEQVQISGGAGNNNNNNNNNPFPDPSSGLPFFNLPMNNVQLPVDAWAGNSTTSTRSPF 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1529 248 MobiDBLite consensus disorder prediction 196 219 - -
Aed11g1529 248 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 24 242 IPR014476 GO:0003680
Aed11g1529 248 ProSiteProfiles PPC domain profile profile. 62 198 IPR005175 -
Aed11g1529 248 SUPERFAMILY AF0104/ALDC/Ptd012-like 62 194 - -
Aed11g1529 248 MobiDBLite consensus disorder prediction 12 55 - -
Aed11g1529 248 Pfam Plants and Prokaryotes Conserved (PCC) domain 66 179 IPR005175 -
Aed11g1529 248 MobiDBLite consensus disorder prediction 191 219 - -
Aed11g1529 248 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 24 242 - -
Aed11g1529 248 Gene3D - 65 198 - -
Aed11g1529 248 MobiDBLite consensus disorder prediction 24 38 - -
Aed11g1529 248 CDD DUF296 66 149 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1529 Aed-Chr11 19552554 19553300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1529 38 248 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 72.986 2.93e-96 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1529 - - gmx:100818680 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1529 11 19552554 19553300 Aed6g0667 6 5709617 5710507 PCT