Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1522 ATGCGTGTCCTCTTTCTGTTTTTGTTTTTCCATCTTCTCCATTTTCATATCCCTGAAACCCTTTCTACACCAATCTCAGAGTACCGTGCCCTTCTCTCTCTCCGTTCAGCCATTACCGATGCCACCCCACCCGTTCTCTCTTCGTGGAACGCCTCCACCCCTTACTGTTCCTGGTTCGGCGTCACCTGCGACAACCGCCACCACGTCACCGCCCTTAACCTCACCGGACTTGACCTCTCCGGCACGCTCTCCGGCGACGTCGCCCACCTCACATTCCTCTCGGACCTCTCCCTCGCCGCCAACAAGTTCTCCGGCCCCATCCCTCCGGCGCTCTCTGCACTCACCGGTCTCCGCCTCCTCAACCTCTCCAACAATGTCTTCAACGAAACCTTCCCCTCGGAGCTCTCGCGCCTCCAGAGCCTCGAGGTCCTTGACCTCTACAACAACAACATGACCGGCGTCCTCCCCCTCGCCGTTGCGCAGATTCCCAACCTCCGCCATTTGCATCTCGGTGGAAACTTCTTCTCCGGCCGGATCCCGCCGGAGTACGGACGCTGGCAGCGCCTCCAGTACCTCGCAGTCTCCGGCAACGAGCTCCAGGGGAATATCCCGCCGGAAATCGGAAACATGACCAGCCTCCAGGAGCTCTACATCGGCTACTACAACACCTACACCGGCGGCATTCCGCCGGAGATCGGCAACTTGTCGGAGCTGGTGAGGCTCGACGCCGCCTACTGTGGGTTGACCGGCGAGATTCCGGCGGAGCTTGGGAAACTTCAGAAGCTGGACACGCTGTTCCTTCAGGTGAATGCATTGTCAGGGTCTCTGACGCCGGAGCTGGGGAACCTGAAGAGCCTGAAATCGATGGATTTGTCTAACAACATGCTATCCGGGGAGATTCCGGTGAGTTTCGGCGAGCTGAATAATATCACGCTTTTGAATCTGTTCAGGAACCAGCTTCTTGGAGCCATACCGGAGTTTATAGGGGAGCTTCCGGCGTTGGAAGTGGTGCAACTGTGGGAGAATAACTTCACTGGTAGCATTCCAGTGGGTTTAGGGAAAAACGGGAGACTCAACCTTGTTGATCTTTCTTCCAACAAGTTAACTGGGACTTTGCCTCCTTATCTCTGTTCTGGGAATACTCTTGAGACTCTTATAACACTGGGGAATTTCCTTTTCGGTCCAATTCCTGAATCGCTTGGGACTTGTGAATCTCTTACCCGGATTCGAATGGGAGATAATTATCTGAATGGTTCCATTCCAAAAGGGCTTTTTGGGCTTCCGAAACTGACGCAGGTTGAGCTTCAGGATAATGATCTCTCTGGAGAGTTTCCTGAGACTGGTGCAGTTGCTGTTAGTCTCGGTCAGATTACTCTCTCTAACAACCACCTTTCGGGGCCTTTGCCTCCCTCCATTGGTAACTTCTCCAGCGTTCAGAAGCTCCTTCTTGATGGCAACATGTTCACCGGTCCGATCCCTCCTCAGATTGGGAGGTTGCAACAGCTTTCTAAGATTGATTTTAGTGGCAACAAGTTCTCGGGTCCTATTGCGTCTGAGATTAGTCACTGTAAGCTCTTAACTTTCCTTGACCTTAGCCGCAATGATCTCACCGGAGACATCCCTGATGAGATAACTGGCATGAGGATATTGAATTACCTCAATCTTTCTAAGAATCATTTGGTGGGTAGCATTCCTTCCTCGATATCATCTATGCAAAGCTTGACCTCTGCTGATTTTTCATACAACAACCTTTCTGGTTTGGTGCCTGGTACCGGTCAATTCAGCTACTTCAATTACACGTCTTTCTTGGGAAACCCTGACCTCTGTGGTCCCTATTTGGGTGCCTGCAAGGATGGGGTTGCCAATGGCTCACACCAACCTCATGTTAAAGGACTCTCCTCCTCTTTGAAGCTTCTACTTGTTGTTGGGTTGCTTGTATGTTCTATTGCTTTTGCCGTGGCAGCAATATACAAGGCTCGCTCACTGAAGAAGGCCAGCGAGGCTCTTCTTGATCCGAGGCTTCCCTCAGTTCCCCTTCACGAAGTGATGCATGTTTTCTATGTTGCCATGCTGTGTGTTGAAGAACAGGCTGTAGAGAGACCAACTATGCGTGAAGTTGTTCAAATACTCACAGAGCTTCCAAAGCCACCTGGCTTTAAGCAGGAAGACTTAACAATAACAGAGTCCTCTTTGTCATCAAACGCTTTAGAATCTCCATCCTCAGCCTCTAAGGATCATCAAAATCCACCCGATCTTCTTAGCATTTAA 2268 0.5119 MRVLFLFLFFHLLHFHIPETLSTPISEYRALLSLRSAITDATPPVLSSWNASTPYCSWFGVTCDNRHHVTALNLTGLDLSGTLSGDVAHLTFLSDLSLAANKFSGPIPPALSALTGLRLLNLSNNVFNETFPSELSRLQSLEVLDLYNNNMTGVLPLAVAQIPNLRHLHLGGNFFSGRIPPEYGRWQRLQYLAVSGNELQGNIPPEIGNMTSLQELYIGYYNTYTGGIPPEIGNLSELVRLDAAYCGLTGEIPAELGKLQKLDTLFLQVNALSGSLTPELGNLKSLKSMDLSNNMLSGEIPVSFGELNNITLLNLFRNQLLGAIPEFIGELPALEVVQLWENNFTGSIPVGLGKNGRLNLVDLSSNKLTGTLPPYLCSGNTLETLITLGNFLFGPIPESLGTCESLTRIRMGDNYLNGSIPKGLFGLPKLTQVELQDNDLSGEFPETGAVAVSLGQITLSNNHLSGPLPPSIGNFSSVQKLLLDGNMFTGPIPPQIGRLQQLSKIDFSGNKFSGPIASEISHCKLLTFLDLSRNDLTGDIPDEITGMRILNYLNLSKNHLVGSIPSSISSMQSLTSADFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLGACKDGVANGSHQPHVKGLSSSLKLLLVVGLLVCSIAFAVAAIYKARSLKKASEALLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPGFKQEDLTITESSLSSNALESPSSASKDHQNPPDLLSI 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1522 755 Gene3D Ribonuclease Inhibitor 381 617 IPR032675 -
Aed11g1522 755 Gene3D Ribonuclease Inhibitor 135 219 IPR032675 -
Aed11g1522 755 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Aed11g1522 755 SUPERFAMILY RNI-like 72 416 - -
Aed11g1522 755 Pfam Leucine rich repeat 116 173 IPR001611 GO:0005515
Aed11g1522 755 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 669 748 - -
Aed11g1522 755 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 668 - -
Aed11g1522 755 MobiDBLite consensus disorder prediction 729 755 - -
Aed11g1522 755 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 669 748 - -
Aed11g1522 755 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 668 - -
Aed11g1522 755 SUPERFAMILY L domain-like 356 613 - -
Aed11g1522 755 Gene3D Ribonuclease Inhibitor 220 380 IPR032675 -
Aed11g1522 755 Gene3D Ribonuclease Inhibitor 26 134 IPR032675 -
Aed11g1522 755 SMART LRR_typ_2 114 137 IPR003591 -
Aed11g1522 755 SMART LRR_typ_2 283 307 IPR003591 -
Aed11g1522 755 SMART LRR_typ_2 331 355 IPR003591 -
Aed11g1522 755 SMART LRR_typ_2 138 161 IPR003591 -
Aed11g1522 755 SMART LRR_typ_2 162 186 IPR003591 -
Aed11g1522 755 SMART LRR_typ_2 571 594 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1522 Aed-Chr11 19490568 19494109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1522 663 755 Receptor kinase-like Gene Family AT5G65700 59.140 1.41e-23 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1522 - - gmx:547593 1170.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1522 11 19490568 19494109 Aed6g0677 6 5884736 5889133 PCT