Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1508 ATGGGAAGAGCTCCTTGCTGTGACAAAGCCAACGTGAAGAAAGGTCCATGGTCACCTGAAGAAGATGCCAAACTCAAGTCTTATATTGAGCAGCATGGCACTGGCGGTAACTGGATAGCCTTGCCCCAGAAAATAGGCCTTAAGAGATGTGGGAAAAGCTGTCGTCTCAGATGGCTTAATTATCTTCGCCCAAACATCAAACATGGGGGTTTCTCAGAAGAAGAAGACAACATCATCTGCAGCCTTTATGTTAGTATTGGAAGCAGGTGGTCAATTATAGCAGCACAGTTACCAGGGCGCACAGACAATGATATAAAGAACTATTGGAACACTAGGCTGAAGAAGAAGCTCCTTGGAAAACAAAGGAAGGAGCAACAGGCTCAAGCTCGCCGAGTCAACAACCAGCAACAGAAGCACGATCATGTGAAAAGAGAAACTGAGAATTTGATAGTGGCTACTTCACAAGTCATCAATCAACAAGTTCCCTATTGGGCTTCAGAGTTTTCTTCGACTGTGCCTATGCCAGTGGCCAATGCTAATTCCTTCCAACACTATGGTCTGAACGATCAAACATCTCTCAGGAGCATGATGGTTAACAAACTAGAGGGAATTAGATTTTCCAACGATCAGCAGCAGCAACAATACACCATTAATGCATGTGAAATCCCCTCCCTACCAGACCAGGTTTTTCCAACCACCGTAGTGAGTAATGAAAACATTAATAGTGGTGTGACTTATCAGCCATCAAATATATTTCAAGGGTTTGAAAACTTCCCAAATGAATTTTGTGAACTGGTCTGCGTGAACCCGCAACAAATGGAGGGTTTTAATAATTATGGAATGGAATCAATGGATCACATGAGTATGAGCAATGGTGGAAGCACGAACACGACTTCAACAGAAAGCACTAGTTGGGGTACTGACATGAGCTCCTTGGTTTACTCTCCTTTGGTTTCTGACTATGAAGGTTGCCGACAAGGAATAATTCCTCAAGATGTTGTTGCTTTCGAAGAGTGTAAGTACTTTGGAATGCAGATGCAATAA 1044 0.431 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGKQRKEQQAQARRVNNQQQKHDHVKRETENLIVATSQVINQQVPYWASEFSSTVPMPVANANSFQHYGLNDQTSLRSMMVNKLEGIRFSNDQQQQQYTINACEIPSLPDQVFPTTVVSNENINSGVTYQPSNIFQGFENFPNEFCELVCVNPQQMEGFNNYGMESMDHMSMSNGGSTNTTSTESTSWGTDMSSLVYSPLVSDYEGCRQGIIPQDVVAFEECKYFGMQMQ 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1508 347 CDD SANT 71 113 IPR001005 -
Aed11g1508 347 MobiDBLite consensus disorder prediction 119 142 - -
Aed11g1508 347 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Aed11g1508 347 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Aed11g1508 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Aed11g1508 347 Gene3D - 70 147 - -
Aed11g1508 347 CDD SANT 16 62 IPR001005 -
Aed11g1508 347 Coils Coil 115 135 - -
Aed11g1508 347 Gene3D - 7 68 - -
Aed11g1508 347 PANTHER TRANSCRIPTION FACTOR RAX3-LIKE 239 329 - -
Aed11g1508 347 SMART sant 13 64 IPR001005 -
Aed11g1508 347 SMART sant 67 115 IPR001005 -
Aed11g1508 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Aed11g1508 347 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Aed11g1508 347 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Aed11g1508 347 PANTHER TRANSCRIPTION FACTOR RAX3-LIKE 1 213 - -
Aed11g1508 347 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Aed11g1508 347 PANTHER OS09G0431300 PROTEIN 1 213 - -
Aed11g1508 347 PANTHER OS09G0431300 PROTEIN 239 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1508 Aed-Chr11 19382878 19384267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1508 1 315 MYB Transcription Factor Family AT3G49690 49.844 8.08e-90 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed11g1508 Myb_DNA-binding 2.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1508 K09422 - gmx:106795158 561.607