Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1505 ATGAAGCCTATAGAAAATGGCAATACCGTTAACATCAATTATCAAAATAGCTGCTTAGGCTTCTCCCTCTCCCCACAAATGAATATAGGTGTTCCTTCACACCCTTCATTCGCAGCTGTTGAAACATTTCCACCAAGCTTTTACCATCATACACCTCTCCATAACTATGGACTGCAAGGGTCCAAGCACCAGCTCCCATGTATAGCTGAGGATGAAAGTCCTGGTTTGAAGAGTTGGTTCTCAAGGAACTTTCCTGCTAGCCATGCACAGAATAATGGAGGCCGCGAATCTGGATCCATTGGATCAATACCATATGGGGATTTGCATTCATTGAATTTGTCTGTGAGTCCTACCTCAGGATCAAGCTGTGTTACAAGTTCACCTCCTCTCACTGATACCAAGAAAAGGGGGCTTGAAACGGTGAACCAGAACCAGAAGCAAGTGGTTCATAGGAAATCCATGGATACCTTTGGGCAAAGAACATCTCAATATAGAGTTTCTAAGGAAAGTTTGTTCATCAGGCATAGGTGGACTGGTAGATATGAAGCTCATCTATGGGACAACAGCTGCAAGAAAGAGGGCCAAGGAAGGAAAGGGAGGCAAGGGGGTTATGATATGGAAGAAAAAGCTGCAAGAGCTTATGATATGGCCGCACTCAAGTATTGGGGACTCTCCTCTCATATAAATTTTCCAGTAATGATTACTTTCTTTCTCATTTCTCTTCTGATTGAGTCTGTATTCAGCTTCCAGGATTTAATAACAGTAACTAATATGCAATTGGAAAATTATCAAAATGAACTAGAGGAAATGAAGAACATGTCGAGACAAGAATATGTTGCTCATTTACGAAGGAAAAGCAGCGGATTCTCAAGAGGGGCCTCCATGTACAGAGGAGTAACAAGGTCTCACAGGCTAGCATTTACACAGCACCACCAACATGGAAGGTGGCAAGCTCGAATTGGAAGGGTGGCTGGGAACAAAGATTTATATCTTGGAACCTTCAGTACACAAGAGGAAGCAGCTGAAGCCTATGACATTGCTGCTATTAAATTCAGAGGACTTAATGCTGTTACTAACTTTGATATAACAAGATACGACGTGGAAAGAATTATGGAGAGCAATAACCTTCTAAGCAGTGAACAAGCTAAGCGGAAAAGATCAGAGATGGAAGATGGAACTAGAACTAGAAACGAGGCTATTGTTACTCAAGAAACCGTTGTAATGCAGAAAAGCCAATCAGAATGGAAGATGGTTCTCTATCCATCATCCCAACAACACCTTGATCAGAATCAACAAAGAACGGCTTTAGATAACAATAACAACAACATGTTTCATCACGAAGTTGAGGAAACCAATAACATGGGAACAGTACACTTGTCAAATCCTTCTTCTCTGGTGACAAGTTTGAGTAGCTCAAGAGAAGAGAGCCCAGATAAGACAAACTTGCCAATTCTCTTTGGAATGCCTTCAACAGTGTCCAAATTATTGGCTAACGTGGATTCTTGGGATCTATCTTCCAATCTCAGGCCTGCGCTTTCTATGCCTCAGTTGCCAATTTTTGCTGCTTGGACCGATGCATAA 1581 0.4194 MKPIENGNTVNINYQNSCLGFSLSPQMNIGVPSHPSFAAVETFPPSFYHHTPLHNYGLQGSKHQLPCIAEDESPGLKSWFSRNFPASHAQNNGGRESGSIGSIPYGDLHSLNLSVSPTSGSSCVTSSPPLTDTKKRGLETVNQNQKQVVHRKSMDTFGQRTSQYRVSKESLFIRHRWTGRYEAHLWDNSCKKEGQGRKGRQGGYDMEEKAARAYDMAALKYWGLSSHINFPVMITFFLISLLIESVFSFQDLITVTNMQLENYQNELEEMKNMSRQEYVAHLRRKSSGFSRGASMYRGVTRSHRLAFTQHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDITRYDVERIMESNNLLSSEQAKRKRSEMEDGTRTRNEAIVTQETVVMQKSQSEWKMVLYPSSQQHLDQNQQRTALDNNNNNMFHHEVEETNNMGTVHLSNPSSLVTSLSSSREESPDKTNLPILFGMPSTVSKLLANVDSWDLSSNLRPALSMPQLPIFAAWTDA 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1505 526 CDD AP2 174 232 IPR001471 GO:0003700|GO:0006355
Aed11g1505 526 Pfam AP2 domain 174 223 IPR001471 GO:0003700|GO:0006355
Aed11g1505 526 Pfam AP2 domain 309 353 IPR001471 GO:0003700|GO:0006355
Aed11g1505 526 Coils Coil 253 280 - -
Aed11g1505 526 SUPERFAMILY DNA-binding domain 174 232 IPR016177 GO:0003677
Aed11g1505 526 MobiDBLite consensus disorder prediction 462 478 - -
Aed11g1505 526 CDD AP2 294 363 IPR001471 GO:0003700|GO:0006355
Aed11g1505 526 ProSiteProfiles AP2/ERF domain profile. 295 361 IPR001471 GO:0003700|GO:0006355
Aed11g1505 526 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 256 524 - -
Aed11g1505 526 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 61 232 - -
Aed11g1505 526 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 256 524 - -
Aed11g1505 526 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 61 232 - -
Aed11g1505 526 Gene3D AP2/ERF domain 295 363 IPR036955 GO:0003700|GO:0006355
Aed11g1505 526 Gene3D AP2/ERF domain 166 233 IPR036955 GO:0003700|GO:0006355
Aed11g1505 526 MobiDBLite consensus disorder prediction 118 137 - -
Aed11g1505 526 SUPERFAMILY DNA-binding domain 310 362 IPR016177 GO:0003677
Aed11g1505 526 MobiDBLite consensus disorder prediction 462 482 - -
Aed11g1505 526 ProSiteProfiles AP2/ERF domain profile. 163 231 IPR001471 GO:0003700|GO:0006355
Aed11g1505 526 SMART rav1_2 295 367 IPR001471 GO:0003700|GO:0006355
Aed11g1505 526 SMART rav1_2 174 237 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1505 Aed-Chr11 19347082 19350180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1505 98 526 AP2-EREBP Transcription Factor Family AT4G37750 47.368 1.41e-119 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Aed11g1505 AP2 1.3e-06 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1505 K09285 - gmx:100794433 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1505 11 19347082 19350180 Aed6g0690 6 6033010 6037789 PCT