Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1492 ATGGCAAGTTCCTTATGTCTATATACTCCCACCTTCTCCGTTGTCAACGAAGTCTACTCTTCCTCCGGCCGTTTCTTTTTCCACCCCCAAAAACCGAAGTTGCAGTTTAAGTCTCGTTGGGGCCCAGAGGCGTGGCCCGTGACGGCCCATTTGAGTAACCGAAAGAAGCTGAATGCGTTGAGCGAAGGAGTGAATGGGTATGGGAGCGTAGATGGAGAAAGCTACCATGGGTCGATGGAGGATAAGCAATTCGTGCGTTCGTTCCGCGAAGCCTGGCCTTACTTGTGGGCCTATCGTGGTAGCACCTTTGTTCTCATTATTTCCGGTGAAATCGATATAGCTTTCCTTCATCACCTAGGAATCCGCTTTGTTCTTGTTCCGGGGACACATGTGCAAATAGACAAGCTTCTCAATGAAAGAGGGTGCCAGCCTAAGTATGTTGGTAGATATAGGATAACTGATGAGGAATCTCTAGAAGCTGCGATGGAAGCAGCTGGAGGAATAAGGTTGATGATAGAAGCAAAACTTTCTCCTGGACCTTCCATTTGCAATATTCGTCGGCATGGTGACAGTAGTCGATGGCATGAAGTTGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTGGTCAATGGAGTTGATTTTGGGTCAACTGGGGAAGTTAAAAAGATAGACGTATCTCGCATGCGTGAGAGACTTGATGGTGGTTGTGTAGTTATATTAACCAACTTGGGCTACTCCAGCTCTGGAGAAGTATTAAATTGCAACACCTATGAAGTTGCCACAGCTTGTGCCTTGGCTATAGGGGCAGACAAGCTAATATGTGTTATAGATGGTCCAATACTTGATGAGAGTGGACGCCTAATTCGTTTCTTGCCTCTTCAAGAAGCAGACATGCTAATTCGTAAACGGGCTGAGCAAAGTGAAGCAGCTGCTAACTATGTGAAAGCTGTTGGTGAAGAAGGTTTCAACTCTCTTGAGTATAACAATTTTAATGGAACAGTCAAATCACCGCCTGGTGGTGTTCAAAGAGTTCACTTGCTGGATGGAACTATTAGTGGAGTTTTGTTGTTGGAATTGTTTAAAAGAGATGGGATGGGAACAATGGTTGCAAGTGATCTTTACGAAGGCACTCGGACGGCAGAGGTCAAAGATATTTCTGGAATAAAACAACTTATTCAGCCTTTGGAGGCATCTGGCATATTGATTAAGCGGACTGATGAAGAGCTGTTACGAACATTGGATTCGTTTGTTGTTGTGGAAAGAGAAGGTCACATAATTGCTTGTGCTGCCCTTTTTCCTCACTTTGAGGAGAAATGTGGAGAGGTTGCTTGCATTGCAGTATCTTCTGATTGTCGTGGCCAAGGACAGGGTGACAAATTGCTTGATTATATGGAGAAGAAAGCATCATCTCTTGGATTGAATATGCTTTTCCTTCTGACAACACGTACAGCAGATTGGTTTGTGAGGCGTGGATTTTCAGAATGTTCAATTGATTATATTCCTGATAAGAAAAGGAGAATGATCAATCTTTCCCGCAATTCTAAGTATTACATGAAGAAGCTTCTGCCAAACAAAAGTGGAATTACTGTTGGTGTAAAATCTGCGTCAAGTTAA 1632 0.44 MASSLCLYTPTFSVVNEVYSSSGRFFFHPQKPKLQFKSRWGPEAWPVTAHLSNRKKLNALSEGVNGYGSVDGESYHGSMEDKQFVRSFREAWPYLWAYRGSTFVLIISGEIDIAFLHHLGIRFVLVPGTHVQIDKLLNERGCQPKYVGRYRITDEESLEAAMEAAGGIRLMIEAKLSPGPSICNIRRHGDSSRWHEVGVSVASGNFLAAKRRGVVNGVDFGSTGEVKKIDVSRMRERLDGGCVVILTNLGYSSSGEVLNCNTYEVATACALAIGADKLICVIDGPILDESGRLIRFLPLQEADMLIRKRAEQSEAAANYVKAVGEEGFNSLEYNNFNGTVKSPPGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRTAEVKDISGIKQLIQPLEASGILIKRTDEELLRTLDSFVVVEREGHIIACAALFPHFEEKCGEVACIAVSSDCRGQGQGDKLLDYMEKKASSLGLNMLFLLTTRTADWFVRRGFSECSIDYIPDKKRRMINLSRNSKYYMKKLLPNKSGITVGVKSASS 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1492 543 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 384 530 IPR016181 -
Aed11g1492 543 CDD AAK_NAGS-ABP 83 375 IPR033719 -
Aed11g1492 543 PIRSF ArgA 74 527 IPR010167 GO:0004042|GO:0005737|GO:0006526
Aed11g1492 543 Gene3D - 381 527 - -
Aed11g1492 543 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 381 529 IPR000182 GO:0016407
Aed11g1492 543 Gene3D - 82 380 IPR036393 -
Aed11g1492 543 PANTHER AMINO-ACID ACETYLTRANSFERASE 69 336 IPR010167 GO:0004042|GO:0005737|GO:0006526
Aed11g1492 543 PANTHER AMINO-ACID ACETYLTRANSFERASE 344 534 IPR010167 GO:0004042|GO:0005737|GO:0006526
Aed11g1492 543 Hamap Amino-acid acetyltransferase [argA]. 79 527 IPR010167 GO:0004042|GO:0005737|GO:0006526
Aed11g1492 543 SUPERFAMILY Carbamate kinase-like 82 377 IPR036393 -
Aed11g1492 543 Pfam Amino acid kinase family 113 304 IPR001048 -
Aed11g1492 543 CDD NAT_SF 422 484 - -
Aed11g1492 543 TIGRFAM N-Ac-Glu-synth: amino-acid N-acetyltransferase 84 527 IPR010167 GO:0004042|GO:0005737|GO:0006526
Aed11g1492 543 Pfam Acetyltransferase (GNAT) family 418 486 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1492 Aed-Chr11 19280666 19285933 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Aed11g1492 AA_kinase 3.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1492 K14682 - gmx:100777694 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1492 11 19280666 19285933 Aed6g0706 6 6216903 6223742 PCT