Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1481 ATGGAGAGTTATTTAAATGAGAATTTTGAAGTGAAGTCAAAAAATTCATCTGAAGAGGCTCTTCAACGATGGAGGAAACTATGCGGGGTGGTGAAGAACCCCAAAAGACGCTTTCGCTTCACTGCAAATCTCTCCAAGAGGGGCGAAGCTGCTGCTATGCGTCGTACCAATCAGACTTATTCTCTTCTTACTGCAGGAGCTGAGGATTGCAGTTTTGGTTTCCAAAGCAGCATTTCAATTTATCCAAGGCAAGTTTCTTCAGAACTAGTATTTTTTATAGCTTATGTATTTAAGAGTCAATATGTTTACTTACCTGTGATCACATCCACAGGCGCGAAACTAAGCGATTACAAAGTGCCAGAGGAAGTTAAAGCTGCAGGTTTTCAAATCTGTGGCGATGAATTGGGGTCTATTGTTGAGGGCCATGATGTAAAGAAGTTCAGACATCACGGTGGGGTTAATGGCATTGCAGAGAGGCTTTCTACATCAACCACTGATGGGCTTAACAGTGATACTGAGTTACTGAATACGAGACAGCAGATATATGGAATCAACAAATTTACTGAAGTTGAAGCTACACGTTTCTGGGTTTTTGTTTGGGAAGCCTTTCAAGACATGACTCTGATGATACTTGGAGTGTGTGCTATTGTGTCATTGCTAGTTGGCATTGCAACAGAAGGGTGGCCAAAGGGTGCTCATGATGGTCTTGGAATTGTTGCAAGTATCTTGCTTGTTGTCTTTGTGACAGCAACAAGTGATTATCGCCAATCATTACAGTTCAAGGATTTGGACAAGGAGAAGAAGAAAATTTCCATTCAGGTCACAAGAAATGGATACAGACAGAAAATGTCAATATATGAATTACTTCCTGGTGACATTGTGCACCTTGCCATTGGTGACCAAGTCCCTGCTGATGGACTTTTTGTCTCAGGATTTTCTGTGTTGATTGATGAGTCAAGCTTAACAGGAGAGAGTGAGCCAGTGATGGTGAATTCTGAAAATCCATTCCTTCTTTCTGGGACCAAGGTCCAAGATGGATCATGCAAGATGCTGGTTACCAGTGTTGGCATGAGGACTCAATGGGGTAAGTTGATGGCTACTCTCAGTGAAGGTGGAGATGATGAAACCCCATTACAGGTGAAGTTGAATGGTGTTGCAACCATTATTGGGAAGATAGGCCTATTCTTTGCGGTGGTTACTTTTGCAGTTCTGGTGCAAGGACTTGTAAGCCAAAAACTCCAACAAGGAAGCTTACGGAGCTGGACCGGGGATGATGCATTGGAGCTGTTGGAGTTCTTTGCAGTAGCAGTTACCATAGTTGTTGTTGCTGTTCCAGAGGGGCTGCCATTAGCTGTGACACTGAGCCTTGCATTTGCAATGAAGAAAATGATGAATGACAAAGCCCTTGTGAGACATTTGGCAGCCTGTGAGACCATGGGTTCAGCCACAACTATATGTAGTGACAAGACAGGGACACTCACAACCAATCACATGACTGTTGTCAAAACATGTTTTTGCATGAACAGCAAGGAAGTGAGCAGCAATAAGGCTTCTAGTTTGTGCTCTGAACTCCCAGAACCTGTTGTGAAACTGCTGCAAGAGTCAATATTCAATAATACAGGAGGAGAGGTTGTGGTTAACCAAAGTGGAAAACGTGAGATTTTAGGGACTCCAACCGAGGCTGCAATATTGGAGTTTGGCTTGTCATTAGGTGGAGATTTTCAAGGAGAGAGACAAGCATGCAAACTTGTTAAAGTTGAGCCATTCAATTCCACTAAGAAAAAAATGTGTGTGGTGGTGGAGCTCCCAGATGGAGGCTTAAGAGCTCACTGCAAAGGTGCTTCTGAAATAGTTCTGGCTGCTTGTGACAAAGTTCTCAACTCAAATGGTGAGGTTGTACCTCTTGATGATGAATCAACTAACCATCTTAATGCTACAATAAACCAGTTTGCAAGTGGGGCACTCAGAACACTATGCCTTGCCTATGTGGAATTGGAAAACGGGTTCTCTCCTGAAGACCCTATTCCTGTTTCTGGATATACTTGTATAGGAGTTGTCGGTATCAAAGATCCTGTTCGTCCCGGTGTTAAGGAATCTGTGGCAATGTGTCGTTCAGCTGGAATAACAGTTAGAATGGTTACTGGTGACAACATTAATACTGCAAAGGCTATAGCCAGGGAGTGTGGGATTTTAACTGATGATGGCATAGCCATTGAAGGTCCAGAGTTTAGAGAGAAGAGTCATAAAGAATTGCTTGAGCTGATTCCCAAAATTCAGGTTATGGCTCGATCCTCACCTTTAGACAAACACACATTAGTGAAACACTTGCGTACCACTTTTGGGGAAGTGGTAGCTGTAACAGGTGATGGAACTAATGATGCCCCAGCCCTTCATGAAGCTGACATTGGACTTGCAATGGGCATTGCTGGAACTGAAGTTGCAAAAGAAAGTGCAGATGTCATAATTCTGGATGATAACTTCTCCACGATAGTAACAGTGGCCAAATGGGGACGTTCGGTTTACATAAATATTCAGAAATTCGTACAGTTTCAGCTAACCGTTAACGTGGTTGCATTGATAGTGAATTTCACATCAGCCTGCTTGACAGGAACTGCACCTCTCACAGCTGTTCAACTCTTGTGGGTGAACATGATAATGGACACACTGGGAGCACTTGCTCTTGCAACTGAACCTCCAAATGATGATTTAATGAAACGTTCACCTGTTGGAAGGAAGGGAAATTTCATCAGCAATGTCATGTGGAGGAACATCATAGGACAGTCATTGTATCAGTTTATGGTGATATGGTTTCTTCAGTCAAGAGGAAAAACAATCTTTTTACTTGAGGGCCCCAATTCAGATCTAGTCTTGAACACGCTTATTTTCAACTCATTTGTCTTCTGTCAGGTTTTCAATGAGATAAATTCACGTGAAATGGAGAAAATAAACGTTTTTAAAGGCATATTAGATAATTATGTTTTCGTGGGTGTCATCAGTGCTACTGTTTTCTTCCAAATCATAATAGTTGAGTACTTGGGAACCTTCGCAAACACAACACCTCTCACCCTGGTACAGTGGTTCTTTTGCTTATTCGTTGGGTTTCTGGGCATGCCTATTGCGGCTCGCTTAAAGAAGATCCCTGTTTGA 3147 0.4255 MESYLNENFEVKSKNSSEEALQRWRKLCGVVKNPKRRFRFTANLSKRGEAAAMRRTNQTYSLLTAGAEDCSFGFQSSISIYPRQVSSELVFFIAYVFKSQYVYLPVITSTGAKLSDYKVPEEVKAAGFQICGDELGSIVEGHDVKKFRHHGGVNGIAERLSTSTTDGLNSDTELLNTRQQIYGINKFTEVEATRFWVFVWEAFQDMTLMILGVCAIVSLLVGIATEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKISIQVTRNGYRQKMSIYELLPGDIVHLAIGDQVPADGLFVSGFSVLIDESSLTGESEPVMVNSENPFLLSGTKVQDGSCKMLVTSVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVLVQGLVSQKLQQGSLRSWTGDDALELLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKTCFCMNSKEVSSNKASSLCSELPEPVVKLLQESIFNNTGGEVVVNQSGKREILGTPTEAAILEFGLSLGGDFQGERQACKLVKVEPFNSTKKKMCVVVELPDGGLRAHCKGASEIVLAACDKVLNSNGEVVPLDDESTNHLNATINQFASGALRTLCLAYVELENGFSPEDPIPVSGYTCIGVVGIKDPVRPGVKESVAMCRSAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPEFREKSHKELLELIPKIQVMARSSPLDKHTLVKHLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFTSACLTGTAPLTAVQLLWVNMIMDTLGALALATEPPNDDLMKRSPVGRKGNFISNVMWRNIIGQSLYQFMVIWFLQSRGKTIFLLEGPNSDLVLNTLIFNSFVFCQVFNEINSREMEKINVFKGILDNYVFVGVISATVFFQIIIVEYLGTFANTTPLTLVQWFFCLFVGFLGMPIAARLKKIPV 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1481 1048 Gene3D - 174 369 - -
Aed11g1481 1048 Gene3D - 483 832 IPR023214 -
Aed11g1481 1048 Gene3D - 496 691 IPR023299 GO:0000166
Aed11g1481 1048 Pfam Cation transport ATPase (P-type) 547 625 - -
Aed11g1481 1048 SFLD p-type atpase 468 839 IPR044492 -
Aed11g1481 1048 Gene3D - 201 1036 - -
Aed11g1481 1048 PRINTS P-type cation-transporting ATPase superfamily signature 684 695 - -
Aed11g1481 1048 PRINTS P-type cation-transporting ATPase superfamily signature 706 716 - -
Aed11g1481 1048 PRINTS P-type cation-transporting ATPase superfamily signature 486 500 - -
Aed11g1481 1048 PRINTS P-type cation-transporting ATPase superfamily signature 787 806 - -
Aed11g1481 1048 PRINTS P-type cation-transporting ATPase superfamily signature 317 331 - -
Aed11g1481 1048 PRINTS P-type cation-transporting ATPase superfamily signature 811 823 - -
Aed11g1481 1048 PANTHER CATION TRANSPORTING ATPASE 4 1047 - -
Aed11g1481 1048 SFLD Haloacid Dehalogenase 468 839 - -
Aed11g1481 1048 Pfam Cation transporting ATPase, C-terminus 872 1045 IPR006068 -
Aed11g1481 1048 SUPERFAMILY Calcium ATPase, transmembrane domain M 149 1047 IPR023298 -
Aed11g1481 1048 SMART Cation_ATPase_N_a_2 147 223 IPR004014 -
Aed11g1481 1048 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 758 873 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed11g1481 1048 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 428 510 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed11g1481 1048 PANTHER CALCIUM-TRANSPORTING ATPASE 1 4 1047 - -
Aed11g1481 1048 Pfam E1-E2 ATPase 270 464 - -
Aed11g1481 1048 Gene3D - 16 63 - -
Aed11g1481 1048 ProSitePatterns E1-E2 ATPases phosphorylation site. 488 494 IPR018303 -
Aed11g1481 1048 CDD P-type_ATPase_Ca_PMCA-like 175 920 - -
Aed11g1481 1048 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 492 696 IPR023299 GO:0000166
Aed11g1481 1048 SUPERFAMILY Calcium ATPase, transduction domain A 272 366 IPR008250 -
Aed11g1481 1048 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 143 1048 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Aed11g1481 1048 PRINTS H+-transporting ATPase (proton pump) signature 819 844 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed11g1481 1048 PRINTS H+-transporting ATPase (proton pump) signature 787 803 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed11g1481 1048 PRINTS H+-transporting ATPase (proton pump) signature 643 661 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed11g1481 1048 Pfam Cation transporter/ATPase, N-terminus 149 218 IPR004014 -
Aed11g1481 1048 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 48 IPR024750 GO:0005516
Aed11g1481 1048 SUPERFAMILY HAD-like 484 892 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1481 Aed-Chr11 19210159 19215435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1481 1 1048 Primary Pumps ATPases AT4G37640 78.360 0.0 1678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1481 K01537 - gmx:100792691 1855.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1481 11 19210159 19215435 Aed6g0719 6 6311593 6318746 PCT