Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1478 ATGGGGAGTTCTGGGACATTCTTTTCCTTGTCTAGCCTCATGTGTGAAGAAGGAGAAACTAGCTTCTTTTTAGAAGACCATGATGAGAACCCTGGCTTTTTTTACTCTCTTGACAATCCATGTTTCGTTTTGGAGGATGAAGAGGATTACATTCAGTATTTGTTCAGACAAGAAACGGGATTTGGATCCCAAAATCGTTACTTTTTTGCCTCTGATGATGATGATGATAATCACTCTAACAAACACTGGTTGAGAAGTGTCCGAGTGAATGCCATTGACTGGATTTTCAATACACAAGCAAAATTTGGGTTCAAAGTTGAGACAGCCTATTTATCAGTGACTTATTTTGATCGGTTTCTATCAAAGCGATCCATAGATGAATCGAAACCTTGGGCTATTCAGTTATTGTCCGTGGCATGTTTATCTCTGGCAGCAAAGATGGAAGAGCAAAATGTGCCGGTTCTATCCGAGTATCCAATTGAAGAGTATCGCTTTGAGAATAAAGTAATTAAGAACATGGAACTGATGGTTTTGACTTCCTTGGATTGGAAAATGGGATCAGCAACTCCTTTTGCCTATTTGCATTACTTTGTCGGCAAGTTCTGCCCTGGATCCAAGCCACAAACAATAATCACTAAAGCCATTGAACATATTGTGGCCATGATCAAAGATGTTAATTTGATGGATCAACGACCATCTATAATTGCCTCGGCTGCCATATTGGCAGCTTTTGATGCTGCATTAACAAGAAAAGCAATGGATCTTCGAATAAGTGTAATCTCATCGTGGGGAAATCTAGAAAGTGAAAAGAGGAAAAGCAAAGTTAAGACCCCTTGCTCGAATTTAATGTCTACCCAGTCGAGCTCCACGTGTGTTCTTGAGAACCAATCATCTGACACTTGTTCGGGAGCTAAGAGAAAACTTAGTTTTGAGGACAATGAAAATTGTGCAGGACAAAAGCTACATCGGCCTTATTATAGGGCTAATGAGTGTCATCATCCACCATTTTGTGGAATGATTTGGTATTGA 1029 0.3984 MGSSGTFFSLSSLMCEEGETSFFLEDHDENPGFFYSLDNPCFVLEDEEDYIQYLFRQETGFGSQNRYFFASDDDDDNHSNKHWLRSVRVNAIDWIFNTQAKFGFKVETAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKMEEQNVPVLSEYPIEEYRFENKVIKNMELMVLTSLDWKMGSATPFAYLHYFVGKFCPGSKPQTIITKAIEHIVAMIKDVNLMDQRPSIIASAAILAAFDAALTRKAMDLRISVISSWGNLESEKRKSKVKTPCSNLMSTQSSSTCVLENQSSDTCSGAKRKLSFEDNENCAGQKLHRPYYRANECHHPPFCGMIWY 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1478 342 Gene3D - 187 247 - -
Aed11g1478 342 Gene3D - 80 186 - -
Aed11g1478 342 Pfam Cyclin, N-terminal domain 51 185 IPR006671 -
Aed11g1478 342 PANTHER CYCLINS 50 263 IPR039361 -
Aed11g1478 342 ProSitePatterns Cyclins signature. 88 119 IPR006671 -
Aed11g1478 342 SUPERFAMILY Cyclin-like 38 185 IPR036915 -
Aed11g1478 342 SMART cyclin_7 93 179 IPR013763 -
Aed11g1478 342 CDD CYCLIN 88 178 IPR013763 -
Aed11g1478 342 PANTHER CYCLIN-D5-1 50 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1478 Aed-Chr11 19200481 19202099 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1478 9 268 Core Cell Cycle Gene Families AT4G37630 34.409 2.74e-41 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1478 K18811 - gmx:100798140 531.561