Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1477 ATGACGACTAACATGGGCGACAATTGTTTGAAGACTGTCCAAAATACTAAGAAAATAACTCCAATGCCACCACCTCCTATGCCCCGTTTAGCAGCAGCAACACGTTGTCCTTGTAGTTGTGGGTCAAAGAATTCTTCAACATCAAGAGATTTGTGGGACCGTCTTTTTTATGAAGCTTATAAAGCAGATGTTTGCATTAACACTGATAACGGTGGCGTTGTTTATGCTCATTCTAACATTCTTGCCATGGCTACTCCTGTTTTCAGGGGCATGCTGAAGTATGCAAAATGTGGTGGTCGATGGCGAACAATCTCACTCACTGGGGTTCCGCATGATGTAGTTCAAGTTTTTATTCGATTCTTATACACGCACAGTTATGAGGAAGAAGAAATGGATGAATTCGTGCTACCTTTGTTGGTGTTGTCACATGTATATGTGGTCCCTCACTTGAAGCGGGAATGTGAGCAGAAGCTAGAACAGGGTTTACTAACCTTAGATAATGTGGTCGATGTTTTTCAACTTGCCTTACTCTGTGACGCTCCAAGACTTAGCCTTATTTGTCACCGTAAGGTGCTCAAAAACTTCAAAGCTGTCTCTGCCTCAGAAGGATGGAAAACAATGAAGCTAAGCCACCCACTTCTAGAAAAGGAAATTCTCATGTCAGTGGTCGATGAAGAAAATATTAAAAAGGAGAGGATGAGAAAAATGAAGGAAAGAAAGGTATATATGCAATTATACGAGGCGATGGAAGCACTTGTTCACATATGTAGAGATGGCTGTCAAACAATTTGTCCACACGATAAAGACTTCAAAGCAAACCAACCGTGTAAGTATGCAGCATGCAACGGGTTAGAATTGCTTGTTCGTCATTTTGCTGGATGCAAGTTAAGAGTCCCTGGAGGTTGTGTTCATTGCAAGAGGATGTGGCAATTATTGGAGCTACACTCTCGATTATGTGCTGAGCCAGATTACTGTAGAGTTCCTTTGTGCAGGAACTTTAAGGAGCGAATATCAAAGCAAACCAAGAAGGACGAAATTAGGTGGAGAAAATTGGTTGAAAAGATCTTGAGAACAAGAGGAATTTGGATAGCACCGTGCTTTTTGCCACAATAA 1113 0.4151 MTTNMGDNCLKTVQNTKKITPMPPPPMPRLAAATRCPCSCGSKNSSTSRDLWDRLFYEAYKADVCINTDNGGVVYAHSNILAMATPVFRGMLKYAKCGGRWRTISLTGVPHDVVQVFIRFLYTHSYEEEEMDEFVLPLLVLSHVYVVPHLKRECEQKLEQGLLTLDNVVDVFQLALLCDAPRLSLICHRKVLKNFKAVSASEGWKTMKLSHPLLEKEILMSVVDEENIKKERMRKMKERKVYMQLYEAMEALVHICRDGCQTICPHDKDFKANQPCKYAACNGLELLVRHFAGCKLRVPGGCVHCKRMWQLLELHSRLCAEPDYCRVPLCRNFKERISKQTKKDEIRWRKLVEKILRTRGIWIAPCFLPQ 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1477 370 SUPERFAMILY TAZ domain 239 339 IPR035898 -
Aed11g1477 370 SMART BTB_4 62 162 IPR000210 GO:0005515
Aed11g1477 370 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 4 11 368 - -
Aed11g1477 370 Gene3D TAZ domain 237 358 IPR035898 -
Aed11g1477 370 SMART TAZ_2 239 331 IPR000197 -
Aed11g1477 370 SUPERFAMILY POZ domain 45 160 IPR011333 -
Aed11g1477 370 Pfam BTB/POZ domain 62 160 IPR000210 GO:0005515
Aed11g1477 370 Gene3D - 164 236 - -
Aed11g1477 370 CDD BACK 164 221 - -
Aed11g1477 370 Gene3D Potassium Channel Kv1.1; Chain A 38 163 IPR011333 -
Aed11g1477 370 ProSiteProfiles BTB domain profile. 62 130 IPR000210 GO:0005515
Aed11g1477 370 ProSiteProfiles Zinc finger TAZ-type profile. 235 333 IPR000197 -
Aed11g1477 370 Pfam TAZ zinc finger 246 330 IPR000197 -
Aed11g1477 370 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 11 368 IPR044513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1477 Aed-Chr11 19192571 19196447 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Aed11g1477 BTB 1.6e-12 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1477 - - gmx:100807461 613.609