Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1474 ATGGGTGATGAGGTAACACCTACAATGGTTGTGAGAGAGTTCGAGTTGAATAAAGACAGAGAGAGAGTAGAAGCCGTTGAAAGGTCGTGCGAGGTTGGACCCAGTGGCAAGCTTTCGCTCTTCACCGACATGCTCGGCGACCCAATTTGCAGGGTCCGCCATTCACCTGCTTTTCTCATGCTGGTGGCGGAGATTGGCGAAGAGATAGTAGGAATGATAAGAGGTTGCATAAAAACCGTGGCCTGCGGGAAAAAGATTCCCAGAAAACACAGCGACACTGATGCGAAACACGTCCCAGTCCCAGTCCCAGTCCCAGTGTACACCAAAGTAGCCTATATACTAGGCCTTCGCGTTTCTCCTCATCAACGGAGAATGGGAATAGGGTTGAAACTAGTGCAGAGAATAGAAGCGTGGTTCAGGGATAACGGCGCAGAGTACTCGTACATGGCAACGGAAAAGGACAATTTAGCGTCCGTTAAACTCTTCACCGACAAATGCGGGTATTCAAAGTTCCGTACCCCTTCCGTCCTTGTCAACCCCGTTTTCGCCCACAGAGCGAGTGTGTCGCCAAAGGTCACAATCATAAACCTTTCCTCCTCCGATGCCGAGGGTCTCTACCGTCGCCGTTTCGCCACCACAGAATTTTTCCCGCGCGACATTGACTCCGTTCTCAGCAACAAGCTCAGCCTTGGGACGTTTCTGGCGGTCCCAAATGGGTCCTACAGGACCGAGACATGGCCCGGCCCAGATCGTTTCCTGTCGGACCCACCGCACTCGTGGGCCATGGTTAGCGTGTGGAACTCGAAGGAGGTGTTCACGCTCGAGGTACGTGGCGCGTCGCGAGTGAAGCGCACGCTCGCGAAGACGACACGCGTGGTCGACCGTGCCCTGCCGTGGCTGCGGTTACCATCGATCCCTGATTTGTTCAGGCCGTTCGGGTTTCACTTCATGTACGGTCTGGGAGGGGAAGGCCGGGAGGGCGTGAAGATGGTGAAGGCCCTGTGTGGGTTTGCGCACAACCTCGCGATGGAAAAAGGGTGCAGGGTGGTGGCCACGGAAGTGTCCCCAAACGAGCCCTTAAGGTTTGGGATACCCCACTGGAAGATGCTGTCGTGTGATGAAGATTTGTGGTGCATGAAGCGCTTGGGCGAGGACTACAGTGACGGTTCCGTTGGTGACTGGACCAAATCTCAATCCGGCAAGTCCATTTTTGTTGACCCGAGGGAGGGTAACCAACAACTTGGAGGTGGAAATGGAGAGAATGAGGAATACATCCCTTTTCACCCAAACGGAACCTTCCTTTCCAGAGTTATTTACCTATGGGCTATCGGAATTCGGACTTTACCTACTTATAATACTAATATTTTTATATTTCTAAATATATTGGAATCTATGACTATGGAGCGCTTTTATAACAATAATGGGATGGGATATGGCTTTTGGGGGAGGATATGA 1455 0.521 MGDEVTPTMVVREFELNKDRERVEAVERSCEVGPSGKLSLFTDMLGDPICRVRHSPAFLMLVAEIGEEIVGMIRGCIKTVACGKKIPRKHSDTDAKHVPVPVPVPVYTKVAYILGLRVSPHQRRMGIGLKLVQRIEAWFRDNGAEYSYMATEKDNLASVKLFTDKCGYSKFRTPSVLVNPVFAHRASVSPKVTIINLSSSDAEGLYRRRFATTEFFPRDIDSVLSNKLSLGTFLAVPNGSYRTETWPGPDRFLSDPPHSWAMVSVWNSKEVFTLEVRGASRVKRTLAKTTRVVDRALPWLRLPSIPDLFRPFGFHFMYGLGGEGREGVKMVKALCGFAHNLAMEKGCRVVATEVSPNEPLRFGIPHWKMLSCDEDLWCMKRLGEDYSDGSVGDWTKSQSGKSIFVDPREGNQQLGGGNGENEEYIPFHPNGTFLSRVIYLWAIGIRTLPTYNTNIFIFLNILESMTMERFYNNNGMGYGFWGRI 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1474 484 CDD NAT_SF 60 146 - -
Aed11g1474 484 Gene3D - 8 177 - -
Aed11g1474 484 Pfam Acetyltransferase (GNAT) family 53 168 IPR000182 GO:0016407
Aed11g1474 484 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 170 IPR016181 -
Aed11g1474 484 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 8 409 - -
Aed11g1474 484 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 195 IPR000182 GO:0016407
Aed11g1474 484 PANTHER N-ACETYLTRANSFERASE 8 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1474 Aed-Chr11 19164990 19166855 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Aed11g1474 Acetyltransf_1 3.2e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1474 - - gmx:100800613 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1474 11 19164990 19166855 Aed6g0723 6 6372530 6373931 PCT