Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1458 ATGTTGGAACTGTGCCGCAAGCCACTGAAGATGTGCTTCGGTGGTGGAGGCAACGACGATGGGCTTCTATGGCACACGGACCTTAAGCCCCACGCTTCAGGTAACTACTCAATTGCAGTGGTACAAGCTAATTCATCCTTGGAAGACCAAGCACAAGTATTCACCTCTCCCTCCGCAACCTTTGTTGGCGTATACGACGGACACGGTGGCCCTGAAGCTTCTCGTTTCATCACCAACCATCTCTTCTCCTTCCTTAGCAAGTTCGCTACAGAAGAAGGTGAATTGTCGGAGGAGGTGATAAAGAAGGCGTTTGGGGCAACCGAGGAGGAGTTTTTGCGTTTAGTGAGGCAATCATGGATTGCGCGGCCACAGATAGCTACAGTGGGTTCGTGTTGTCTTCTGGGAGCGATTTCGAAAGGAGTTCTTTACGTTGCTAATCTCGGGGATTCGAGGGCGGTTTTGGGTCGGAAAGCGTTGGAAGGAGAGGTGGTGGCAGAGCGTTTGTCCACTGATCATAATGTTGGAGTGGAGGAGGTCAGAAAAGAGGTTGAAGCTCTTCACCCTGATGATGCACACATTGTCGTTTGCATTCGTGGAGTCTGGCGAATCAAGGGCATTATTCAGGTCTCAAGATCAATTGGAGATGTTTACCTAAAGAAACCAGAATTTGACACTAATCCTCTGTTCCAACAATTTGTATATCCATTATACTTGAAGAGACCTGTAATGACAGCTGAACCATCGATATTGATGCGAAAGTTGAAGGCAGATGATTTGTTTTTGATCTTTGCATCTGATGGACTTTGGGAGCATTTAACTGATGAAGCGGCTGTTGAAATAATCTTCAGAAGCCCCAGAATAGGAATAGCAAAACGATTGGTGAGAGCTGCACTAGAAGAGGTTGTAAAGAAAAGAGAAATGAAGTATGAGGATCTGAGGAAAACTGATAAAGGTCTAAGGCGCCATATTCATGATGATATTACAGTGATCGTTCTATATCTCGATCATTCAAAAGAATCTCTAAATGGAAGATCAAGACATAAAGGAGTTTATGATTGCATTAATACTCCAGCTGATATCTTCTCTCTGAGCTCAGATAAAACTGATCTTTAA 1113 0.4456 MLELCRKPLKMCFGGGGNDDGLLWHTDLKPHASGNYSIAVVQANSSLEDQAQVFTSPSATFVGVYDGHGGPEASRFITNHLFSFLSKFATEEGELSEEVIKKAFGATEEEFLRLVRQSWIARPQIATVGSCCLLGAISKGVLYVANLGDSRAVLGRKALEGEVVAERLSTDHNVGVEEVRKEVEALHPDDAHIVVCIRGVWRIKGIIQVSRSIGDVYLKKPEFDTNPLFQQFVYPLYLKRPVMTAEPSILMRKLKADDLFLIFASDGLWEHLTDEAAVEIIFRSPRIGIAKRLVRAALEEVVKKREMKYEDLRKTDKGLRRHIHDDITVIVLYLDHSKESLNGRSRHKGVYDCINTPADIFSLSSDKTDL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1458 370 Coils Coil 295 315 - -
Aed11g1458 370 ProSiteProfiles PPM-type phosphatase domain profile. 35 334 IPR001932 -
Aed11g1458 370 Gene3D - 25 342 IPR036457 -
Aed11g1458 370 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 3 369 - -
Aed11g1458 370 SUPERFAMILY PP2C-like 40 336 IPR036457 -
Aed11g1458 370 CDD PP2Cc 42 334 IPR001932 -
Aed11g1458 370 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
Aed11g1458 370 SMART PP2C_4 28 332 IPR001932 -
Aed11g1458 370 PANTHER ALPHABET, ISOFORM E-RELATED 3 369 - -
Aed11g1458 370 Pfam Protein phosphatase 2C 57 298 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1458 Aed-Chr11 19055050 19058709 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1458 17 340 PP2C-type Phosphatase Gene Family AT3G51370 54.354 1.16e-135 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1458 - K01102 gmx:100802394 689.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1458 11 19055050 19058709 Aed1g1995 1 16874601 16877989 PCT