Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1440 ATGCCTGAACCATACTCTTCCACCTCTTTCCAACATCATTCTCAACCTTCACCTTTGACTTTTCCCGACAACCTCCACTTCTTCTCCCAACACGACCACCTCCTCTCTCTACTCTCCAAAGAGACCACCGCTGCCACACATTCCCCTCTCTCTCCTCGCCACGCCGTCGTACGTTGGATTTCTAAAGTCTCCAGCTTTCACTGTTTCGCTCCTCTCACCACCGTTCTCGCCGTTAACTACTTCGACAGGTTTGTAACGAGCCTCAGGTTCCAGACGGAACAAAAACCATGGATGACTCAGCTGGCCGCAGTTGCTTGCGTATCTCTCGCCGCCAAAGTTGAGGAGACACAAGTTCCGCTTCTTTTGGACTTCCAAGTGGAGGATTCGAAATTCTTGTTTGAAGCAAAGACTATACAGAGAATGGAGCTCCTAGTCTTGTCTACTCTTGAATGGAAAATGAACCCCGTCACTCCAATTTGTTTCTTTCAACACATTCTCACAAGGCTTTCTTTAAAGCGCCACTTGCATTGGGACTTTCTGTGTAGGTGCCAACGTCTTCTTCTCTCTGTCATTGCGGATTCAAGGGTTATGAGTTATCTTCCTTCTACATTGGCTGCTGCTATAATGATCCACGTTATTAAAGAGATTGAACCATGTAATGCAACGAAGTACCGAAATCAGCTTCTTGGTTTGCTTAAAAGCAGTGAGGAACAAGTGGATGAGTGCTACAAACTCATGCTGAGACTATTAGCTTGCTGTGAAGGCATTCACAATCTTGGTCAGAGGCGCAAACGTTTATCTGAACCAAGTAGCCCAGATGGGATCATTGATGCATCTTTCAGTTGTGAAAGCTCAAATGATTCATGGACAGTTGCATCACCTTCAGTAGAGCCAGTGTTTAAGAGGAGAAAACCTCAGGACCAGCAGATGCGGTTGCCTCCGCTGAATCGAGTGGCTATTGATATTCTAAATGCTCCTCGTTGA 984 0.4624 MPEPYSSTSFQHHSQPSPLTFPDNLHFFSQHDHLLSLLSKETTAATHSPLSPRHAVVRWISKVSSFHCFAPLTTVLAVNYFDRFVTSLRFQTEQKPWMTQLAAVACVSLAAKVEETQVPLLLDFQVEDSKFLFEAKTIQRMELLVLSTLEWKMNPVTPICFFQHILTRLSLKRHLHWDFLCRCQRLLLSVIADSRVMSYLPSTLAAAIMIHVIKEIEPCNATKYRNQLLGLLKSSEEQVDECYKLMLRLLACCEGIHNLGQRRKRLSEPSSPDGIIDASFSCESSNDSWTVASPSVEPVFKRRKPQDQQMRLPPLNRVAIDILNAPR 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1440 327 Gene3D - 155 244 - -
Aed11g1440 327 SUPERFAMILY Cyclin-like 36 154 IPR036915 -
Aed11g1440 327 PANTHER CYCLINS 9 309 IPR039361 -
Aed11g1440 327 SMART cyclin_7 160 248 IPR013763 -
Aed11g1440 327 SMART cyclin_7 58 147 IPR013763 -
Aed11g1440 327 CDD CYCLIN 57 146 IPR013763 -
Aed11g1440 327 SUPERFAMILY Cyclin-like 138 251 IPR036915 -
Aed11g1440 327 SMART Cyclin_C_2 156 284 IPR004367 -
Aed11g1440 327 Gene3D - 52 154 - -
Aed11g1440 327 Pfam Cyclin, N-terminal domain 48 154 IPR006671 -
Aed11g1440 327 Pfam Cyclin, C-terminal domain 156 251 IPR004367 -
Aed11g1440 327 PANTHER CYCLIN-D3-2 9 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1440 Aed-Chr11 18921632 18927845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1440 27 317 Core Cell Cycle Gene Families AT5G67260 49.675 7.98e-95 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1440 K14505 - gmx:100802683 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1440 11 18921632 18927845 Aed1g1951 1 16617041 16618896 PCT
Aed6g0775 6 6907397 6910663 Aed11g1440 11 18921632 18927845 PCT