Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1435 ATGGCCGTGGAGCTCATGATGGGGTATAGGAACGAGAGTTTCGCGGAAGAGAATGCGGTTCGTGAAGCTGCTTCGGGGCTAGAGAGCGTTGAGAAACTCATCAAACTTCTGTCTCAGACTCAACAACAATACTCCTCCCAGTCCCAGACACCCAATTCGACTTCTATGGAAAACATTGACACCGACTACAGAGCTGTCGCTGACGTGGCCGTTTCTAAGTTCAAGAAGGTCATTTCCCTTCTTGGTCGCACCAGAACCGGTCACGCGCGTTTCAGAAGAGCCCCTGTTCCTGTTCCTGTTCCTCCACCTTCGGAACCGAGAGTCTATCGTGCTACGCCGCTGCAGCAGATCCCGCCACCACCACCCACTGACGGTCACTCTTTGATCCCCAAAATTGAGAGAAAGGACTCTTCCAAGACCATTCATTTCTCCTACTCTAATTCCTTCGTCTCCTCCCTCACCGGCGACACCGACTCTAAGCAACCCTGCTCCTCGTCGCCGTCGCCGGTCACCACTTTTCAGATCACGAATCTCTCTCAGGTCTCCTCCGCGGGAAAGCCTCCTCTTTCCACCTCTTCGTTGAAGAGGAAGTGTAGCTCTGACAACTTGGGCTCTGCCAAGTGTGGCAGTTCCTCTAGCCGATGCCATTGTTCTAAGAAGAGCAGAAAAATGAGGTTGAAGAGGGTGGTGAGGGTACCAGCCATAAGCTTGAAGATGGCTGATATTCCACCCGATGATTATTCTTGGAGGAAATACGGACAGAAACCTATTAAAGGATCCCCTCATCCAAGAGGGTATTACAAGTGCAGCAGTGTTAGAGGGTGTCCAGCGCGGAAGCATGTAGAGAGGGCTCTGGATGATCCATCTATGTTGGTAGTGACCTATGAAGGAGAGCACAATCACACACTCTCTACGGCAGAAGCTTCTAATCTCATCCTAGAATCCTCCTAA 951 0.5121 MAVELMMGYRNESFAEENAVREAASGLESVEKLIKLLSQTQQQYSSQSQTPNSTSMENIDTDYRAVADVAVSKFKKVISLLGRTRTGHARFRRAPVPVPVPPPSEPRVYRATPLQQIPPPPPTDGHSLIPKIERKDSSKTIHFSYSNSFVSSLTGDTDSKQPCSSSPSPVTTFQITNLSQVSSAGKPPLSTSSLKRKCSSDNLGSAKCGSSSSRCHCSKKSRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHTLSTAEASNLILESS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1435 316 SUPERFAMILY WRKY DNA-binding domain 240 303 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed11g1435 316 MobiDBLite consensus disorder prediction 181 213 - -
Aed11g1435 316 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 13 316 IPR044810 GO:0003700
Aed11g1435 316 Pfam Plant zinc cluster domain 195 241 IPR018872 -
Aed11g1435 316 SMART WRKY_cls 243 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed11g1435 316 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 13 316 - -
Aed11g1435 316 ProSiteProfiles WRKY domain profile. 238 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed11g1435 316 Pfam WRKY DNA -binding domain 245 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed11g1435 316 Gene3D WRKY domain 229 304 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1435 Aed-Chr11 18892335 18895908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1435 1 307 WRKY Transcription Factor Family AT2G24570 43.658 1.68e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed11g1435 WRKY 3.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1435 - - gmx:100804089 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1435 11 18892335 18895908 Aed6g2074 6 23391226 23395467 PCT
Aed6g0781 6 6970320 6972422 Aed11g1435 11 18892335 18895908 PCT