Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1431 ATGGAGGGCGGTGAAGGAGGAGAGAGAGCAACACCAGCAGCAACGCGGAAGAGAAGCAGCGAGGGTGGCGCCGCCGCCGCCGCCGAGAGAAGATTCAAAGGAATAAGGATGAGGAAGTGGGGCAAGTGGGTTGCTGAAATTAGAGAACCCAATAAGCGTTCTAGGATTTGGCTCGGTTCCTATTCTACCCCTGTCGCCGCCGCACGTGCCTACGACACCGCCGTATTTTATCTCCGGGGACCCTCCGCCCGCCTCAACTTCCCCGACCTTCTCATCGGAGATGGCGCCGCCCTCCTCGCCGCTTGTGACATGTCAGCGGCTTCTATTAGGAAGAAGGCCACCGAGGTCGGTGCTAGAGTCGATGCTCTTCAGGCAACCCTTCATCACCACCACCACCATGTCCCTCCGCCGCCGCAGCTTCTCTCCGCCGCTGGTGGTGGCTCCGGGGATTTTTTGGAGCGGGTTGTTGACCTGAATAAGATGCCCGAGCCCGAGAGTTCGGACGGTGAGTGGGATGTGAATTGA 525 0.5943 MEGGEGGERATPAATRKRSSEGGAAAAAERRFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPDLLIGDGAALLAACDMSAASIRKKATEVGARVDALQATLHHHHHHVPPPPQLLSAAGGGSGDFLERVVDLNKMPEPESSDGEWDVN 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1431 174 PRINTS Ethylene responsive element binding protein signature 32 43 IPR001471 GO:0003700|GO:0006355
Aed11g1431 174 PRINTS Ethylene responsive element binding protein signature 70 90 IPR001471 GO:0003700|GO:0006355
Aed11g1431 174 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 11 168 - -
Aed11g1431 174 CDD AP2 32 90 IPR001471 GO:0003700|GO:0006355
Aed11g1431 174 SUPERFAMILY DNA-binding domain 31 89 IPR016177 GO:0003677
Aed11g1431 174 Pfam AP2 domain 31 80 IPR001471 GO:0003700|GO:0006355
Aed11g1431 174 Gene3D AP2/ERF domain 30 89 IPR036955 GO:0003700|GO:0006355
Aed11g1431 174 ProSiteProfiles AP2/ERF domain profile. 31 88 IPR001471 GO:0003700|GO:0006355
Aed11g1431 174 MobiDBLite consensus disorder prediction 1 28 - -
Aed11g1431 174 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-10 11 168 - -
Aed11g1431 174 SMART rav1_2 31 94 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1431 Aed-Chr11 18868418 18868942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1431 1 172 AP2-EREBP Transcription Factor Family AT5G67190 53.061 2.34e-56 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed11g1431 AP2 2.2e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1431 K09286 - gmx:100527066 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1431 11 18868418 18868942 Aed6g0789 6 7086951 7087412 PCT