Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1425 ATGGCGTCGCCGCCCTCGCCTCCCAGATCAGAGCCTCTCGTCGATCCCTCCGAAACGAAAATGGAGGGTTCAAGTCCGGCTGTTAAAGATGTGTTACTGATTATTGATTCTTTAAAGAAACGAGTTGCTGCAGAACGGGTTGTTTATGTAAAGAAAAGAATAGAGGAAAACAGACAGAAGCTAGTTGGTGTTACTAATCATCTCTTCACAATGTCAACGGATAGAAGAAACTGCAGTATTACTGATACGAATAGAGGTCTGGATCTACTGACAAAGAGGCAAAAAGATGCAATTGATATGCACAATGGTGTTCATGCGAGTAATGGTGATGTGGAGGGAAATGGCTATCATGATGATAGCCATGGTTCTACAGCAGTTCTTCTAGGGTCTAATGTTGCAGTAAAGAATGCTGTTCGTCCTATCAAGTTACCTGAAGTAAAAAAATTGCCTCCTTACACTACATGGATTTTTCTGGACAGAAATCAAAGAATGACTGAGGATCAATCAGTTTTAGGCCGAAGACGAATTTATTATGATCAAAATGGTGGAGAAGCACTTATTTGCAGTGATAGTGAGGAGGAAATTATGGAGGATGAAGAGGAGAAAAGAGAGTTTATAGAATCAGAAGATTATATACTTCGCATGACTGTCAAAGAGTTTGGTTTAACTGACATTGTTCTGGAGTCGTTGGCTCAGTGTTTTTCTAGAAACACTAATGAAATTAAGGCAAGGTATGAAACTCTTAGTATTCAAGACAATGCTGGTGGGTGTTCCAAGGCTGGAGATTCCAAAGAGAATTCTCAAAGTGGCAATTCTTTTCTGGAAAAGGATCTTGAAGCAGCTCTTGACTCTTTTGACAACCTCTTTTGTCGACGATGTCTTGTTTTTGATTGTAGATTACATGGATGTTCACAGGATCTTGTCTTCCCTGCTGAGAAGCAACCTACATGGAACCCTCCTGATACTGAAAATGCACCCTGTGGACCAAATTGTTTCCGATCGGTCCTTAAGTCGGAAAGATTTTCCAAAACATCCTCTGCCCAGGCTGATGAAGAGAAGTCCTCTGGTGGTGCTTTATCTAGGAAAAAATCTTCAGCTAAGAGGCGGATAAAATGCAGCCAAAGTGAAAGTGCTTCATCTAATGCAAAGAACATATCAGAGAGTAGTGACTCAGAGAATGGTGGTCCGGGAAGAGATGCTGTCTCAGCCTCCCACTCAGCACCTCCTAAATCTAAACCTGTGGGGAAAGGTGGAATTGGTAAAAGGAACAGTAAGCGAGTGGCAGAACGAGTCCTAGTATGCATGCAGAAACGGCAGAAGAAAACAATGGTTTCTGATTCTGATTCCATTAGTGAAGCTCTTGACCGTTCATCGAATGATATGGTCACTGATCCACATACCATGAGCAGTGAAGACAACATGAGGAAAGAAGAGTTTGTAGATGACAATGTTTGTAAACCAGAAATCACAGATGATAAATCTTGGAAAGCTCTTGAAAAGGGGCTTTTGGAGAAAGGAATGGAGATTTTTGGTAGAAACAGTTGCTTAATAGCTAGGAATCTCTTAAATGGTTTGAAGACATGTTGGGATGTTTTCCAATACATAAATTGTGAAGATGGAAAGATGTCTGGTCCTCCAGGGGATATTGCAAATTCCCTCATGGAAGGCTATTCCAAGGGTAATAATGAAGTGAGACGGAGGTCTAGATTCTTACGTCGAAGAGGAAGAGTTCGTCGATTGAAGTACACCTGGAAATCTGCTGCTTATCATTCAATTAGAAAAAGGATTACAGAGAGAAAGGATCAGCCCTGCCGACAGTATAATCCATGTGGTTGCCAGTCGGCTTGTGGAAAGCAGTGTCCTTGTCTTCAAAATGGAACCTGCTGTGAGAAGTACTGTGGATGCCCCAAGAGCTGCAAGAATCGATTTCGTGGCTGTCATTGTGCTAAGAGTCAATGTAGAAGCCGTCAATGTCCATGTTTTGCTGCAGATAGGGAATGTGATCCAGATGTTTGTAGGAATTGTTGGGTCAGTTGTGGCGATGGTACACTTGGGATTCCTAGCCAGAGAGGGGACAATTATGAATGTAGAAACATGAAGCTTCTTCTCAAACAGCAGCAAAGGGTTCTTCTTGGAAGGTCTGATGTATCAGGCTGGGGAGCCTTCTTAAAGAATAGTGTTGGTAAGCATGAATACCTTGGAGAGTATACTGGAGAGTTGATTTCTCATCGGGAAGCAGATAAGCGAGGAAAGATATATGACCGTGAAAATTCATCATTTCTCTTTAATTTGAACGATCAGGCAAGCTTTTACTACGATTTTGTTCTTGATGCTTACCGAAAGGGTGATAAATTGAAGTTTGCGAATCATTCTCCTGATCCAAATTGCTATGCGAAGGTAATTATGGTTGCTGGAGATCATAGGGTAGGCATTTTTGCCAAGGAACGGATTTGTGCTGGGGAGGAACTGTTCTATGATTATCGTTATGAACCCGATAGAGCTCCTGCCTGGGCTCGGAAGCCAGAGGCATCTGGATCAAAAAAAGAGGATGGGGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCTTAA 2589 0.4222 MASPPSPPRSEPLVDPSETKMEGSSPAVKDVLLIIDSLKKRVAAERVVYVKKRIEENRQKLVGVTNHLFTMSTDRRNCSITDTNRGLDLLTKRQKDAIDMHNGVHASNGDVEGNGYHDDSHGSTAVLLGSNVAVKNAVRPIKLPEVKKLPPYTTWIFLDRNQRMTEDQSVLGRRRIYYDQNGGEALICSDSEEEIMEDEEEKREFIESEDYILRMTVKEFGLTDIVLESLAQCFSRNTNEIKARYETLSIQDNAGGCSKAGDSKENSQSGNSFLEKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVFPAEKQPTWNPPDTENAPCGPNCFRSVLKSERFSKTSSAQADEEKSSGGALSRKKSSAKRRIKCSQSESASSNAKNISESSDSENGGPGRDAVSASHSAPPKSKPVGKGGIGKRNSKRVAERVLVCMQKRQKKTMVSDSDSISEALDRSSNDMVTDPHTMSSEDNMRKEEFVDDNVCKPEITDDKSWKALEKGLLEKGMEIFGRNSCLIARNLLNGLKTCWDVFQYINCEDGKMSGPPGDIANSLMEGYSKGNNEVRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQASFYYDFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERICAGEELFYDYRYEPDRAPAWARKPEASGSKKEDGAPSSGRAKKLA 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1425 862 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 22 454 IPR045318 GO:0006338|GO:0018024
Aed11g1425 862 MobiDBLite consensus disorder prediction 371 395 - -
Aed11g1425 862 MobiDBLite consensus disorder prediction 342 425 - -
Aed11g1425 862 ProSiteProfiles CXC domain profile. 593 692 IPR026489 -
Aed11g1425 862 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 454 860 IPR045318 GO:0006338|GO:0018024
Aed11g1425 862 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 22 454 - -
Aed11g1425 862 MobiDBLite consensus disorder prediction 1 23 - -
Aed11g1425 862 Pfam SET domain 718 827 IPR001214 GO:0005515
Aed11g1425 862 SMART CXC_2 641 678 IPR033467 -
Aed11g1425 862 SMART set_7 707 834 IPR001214 GO:0005515
Aed11g1425 862 MobiDBLite consensus disorder prediction 837 862 - -
Aed11g1425 862 MobiDBLite consensus disorder prediction 837 855 - -
Aed11g1425 862 MobiDBLite consensus disorder prediction 446 468 - -
Aed11g1425 862 Pfam CXC domain 645 676 IPR041355 -
Aed11g1425 862 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 454 860 - -
Aed11g1425 862 ProSiteProfiles SET domain profile. 707 828 IPR001214 GO:0005515
Aed11g1425 862 Coils Coil 189 209 - -
Aed11g1425 862 CDD SET_EZH 707 829 - -
Aed11g1425 862 SUPERFAMILY SET domain 581 833 IPR046341 -
Aed11g1425 862 MobiDBLite consensus disorder prediction 438 473 - -
Aed11g1425 862 Gene3D SET domain 607 830 IPR046341 -
Aed11g1425 862 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 15 862 IPR025778 GO:0031519
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1425 Aed-Chr11 18818695 18827621 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1425 696 831 C2H2 Transcription Factor Family AT2G23740 27.891 6.07e-11 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aed11g1425 SET 2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1425 - K11430 gmx:100799832 1613.2