Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1422 ATGCCGTCATCGAGGGTGCTGTCGTCGAGGATGAAGTGCAACTGGATTCGCGGAAAATCTCTTGGTAGTGGCAGCTGTGGCTCGGTCAACATAGTCATACCAAACAACACTTCCGGATACATTCCACCACCCACCGCGGTCAAATCCTCCATTGTCAATAAGTCGCATACGCTCGTGAACGAGGAGTACGTACTTCAGTCTCTCGGACCGTCCCCTTACATCATCAAATGCTATGGGCAGGACCTCACCATTGAAAACGGTCGGGCATTATATAACATTTTTCTCGAATATGCCGAGGGTGGTTCCCTCTACGATCACATCATCAATCGTGGCGGAGGGGGGCTTACGGAGGCTTGCGTACGACAATACACCAGGGCCATTGCAGAGGGTCTGAGACACATCCACTCCAAAGGCTTCGTCCACTGCGATGTGAAGCCTGAAAACATTCTGGTTTTCAACCACGGCGCCGTTAAGATTGCAGATTTCGGGCTGGCAAAGATGAAAGGAGAGACTAACACCGAGTATCGTCGCAGAGGGACACCCATGTACATGTCTCCAGAATCAGTGAATCGGAATGAGTATGAGTCGCCCGTAGATATATGGGCCCTCGGTTGCACCGTGATAGAAATGATATCAGGAGCAAACGTCTGGGATGTGGGTGAGGGGGAGATTAAGACGTGGACGCCGTTGTTGAATCTGATAGGGAAGGGAAAAGAAATGCCCAACATTCCAAAAAAGCTATCAATAGAAGGGAAAGACTTCCTGGACAAGTGTCTAGTTAAAGATCCCCAGAAAAGGTGGACTGCTGAAATGCTTATCAACCACCCTTTCATCAAGAACAGCAACCCACCCTCAGCATCAAACAATCCATCATCATTAAGTAAGGATCAAATCATTCCCTAA 903 0.4884 MPSSRVLSSRMKCNWIRGKSLGSGSCGSVNIVIPNNTSGYIPPPTAVKSSIVNKSHTLVNEEYVLQSLGPSPYIIKCYGQDLTIENGRALYNIFLEYAEGGSLYDHIINRGGGGLTEACVRQYTRAIAEGLRHIHSKGFVHCDVKPENILVFNHGAVKIADFGLAKMKGETNTEYRRRGTPMYMSPESVNRNEYESPVDIWALGCTVIEMISGANVWDVGEGEIKTWTPLLNLIGKGKEMPNIPKKLSIEGKDFLDKCLVKDPQKRWTAEMLINHPFIKNSNPPSASNNPSSLSKDQIIP 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1422 300 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Aed11g1422 300 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 14 282 - -
Aed11g1422 300 Pfam Protein kinase domain 18 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1422 300 MobiDBLite consensus disorder prediction 278 300 - -
Aed11g1422 300 CDD STKc_MAPKKK 14 278 - -
Aed11g1422 300 Gene3D Transferase(Phosphotransferase) domain 1 104 298 - -
Aed11g1422 300 SUPERFAMILY Protein kinase-like (PK-like) 13 287 IPR011009 -
Aed11g1422 300 ProSiteProfiles Protein kinase domain profile. 15 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1422 300 SMART serkin_6 15 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1422 300 Gene3D Phosphorylase Kinase; domain 1 8 103 - -
Aed11g1422 300 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 14 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1422 Aed-Chr11 18803986 18804888 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1422 15 278 MAP Kinase Kinase Kinase AT3G50310 52.612 5.73e-97 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aed11g1422 Pkinase 2.5e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1422 - - gmx:100816949 362.844