Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1421 ATGAGTCCCATTAAGGAAGAGCAAGAGCCAAACCAAATCGCTGGCCACAAAGAACTCGGTCACAAAAGCCTCCTTCAGAGCGATGCACTCTATCAGTATATACTTGACACCAGTGTGTACCCGAGAGAGCATGAGAGCTTGAAGGAGCTACGAGAGTTGACGGAAAAACACCCTTGGAACCTGATGGCTACACCACCTGACGAAGGACAACTTCTAGGCATGTTACTTAAGCTTATAAACGCCAAGAACACCATGGAAATAGGCGTCTTCACTGGTTACTCCTTGCTTTCCACTGCCCTCGCCCTCCCTTCTGACGGAAAGATCTTAGCGATGGATGTTAATCGGGAATATTATGAACTGGGATTGCCTGTAATTCAAAAGGCCGGTGTGGCTCACAAGATTGACTTCAGAGAAGGACCTGCTCTTCCTCTTCTTGACCAACTCATCAAAGACGAAAAGAATAAGGGAACGTTCGATTTCATCTATGTGGATGCTGATAAGGACAACTACTTGAACTACCACGATAGAGTGATTGAGCTTGTCAAGGTTGGTGGATTGATCGGCTATGATAACACCCTGTGGAATGGTTCCGTGGCAGCCCCACCCGATGCGCCTCTCATGGATTATGTTAGGTATTATCGTGATTTCGTCATGGACCTCAACAAAGCTCTTGCACTTGATTCAAGGGTCGATATTTGCCAGATTCCTGTTGGTGATGGGATTACCTTGTGCCGTCGCATCATCTGA 747 0.4685 MSPIKEEQEPNQIAGHKELGHKSLLQSDALYQYILDTSVYPREHESLKELRELTEKHPWNLMATPPDEGQLLGMLLKLINAKNTMEIGVFTGYSLLSTALALPSDGKILAMDVNREYYELGLPVIQKAGVAHKIDFREGPALPLLDQLIKDEKNKGTFDFIYVDADKDNYLNYHDRVIELVKVGGLIGYDNTLWNGSVAAPPDAPLMDYVRYYRDFVMDLNKALALDSRVDICQIPVGDGITLCRRII 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1421 248 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 2 248 - -
Aed11g1421 248 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 23 247 IPR002935 GO:0008171
Aed11g1421 248 PANTHER O-METHYLTRANSFERASE-RELATED 2 248 - -
Aed11g1421 248 Gene3D Vaccinia Virus protein VP39 22 248 IPR029063 -
Aed11g1421 248 Pfam O-methyltransferase 36 247 IPR002935 GO:0008171
Aed11g1421 248 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 27 246 IPR029063 -
Aed11g1421 248 CDD AdoMet_MTases 89 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1421 Aed-Chr11 18800924 18802190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1421 6 247 Monolignol Biosynthesis Gene Families AT4G34050 76.860 1.56e-145 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1421 K00588 - gmx:100799303 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1421 11 18800924 18802190 Aed6g0804 6 7263524 7265874 PCT