Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1417 ATGACTGAATATCACTCCTCCGACGAGCTCTCGAACCCAACCTCCATCTTCGGGCTCCGACTATGGGTGGTGCTGGGCGTGTGCGTGGGCGCCGCCATCGTCCTGATCCTGTTCCTCATCTCCGTCTGGCTAGTCTTAAAGCGCTCAAAAAGCAACCCCGTTACCATCATCCCGGACGTCTCAAAGGAGATCCAAGAAATCAGGCTGGACACTTTCCCGGACCACCCTTTCCCCGAACCTGAGCCCGTTCCTCCCTCCTCTTCAGAAGAACACAGAATCCAGTTCGATATTGGGAAGAACCACAGAATCTCCTACCCTGAACGTGCCTTGCTTCGGTCCAGCTCAAAATCCAATGACCCACCCGATCAGGTTCCCACTGTGATTCCAGAAGTTTCTCACTTGGGTTGGGGCCACTGGTACACTCTCCGTGAGCTCGAGGATTCCACCAACGCCTTCTCCCCTGACAATGTTATTGGCCAAGGTGGTTACGGTATTGTTTATCACGGTATCCTCAACGACAACTCTCATGTTGCTATTAAAAACTTGCTCAATAATAAGGGCCAAGCTGAGAGGGAGTTCAAGGTCGAAGTGGAAGCTATTGGACGAGTTCGCCACAAGAATTTAGTCAGGTTGCTTGGTTATTGTGCTGAAGGAGCTCATAGAATGCTTGTTTATGAGTACGTTGACAATGGCAATTTAGAGCAGTGGCTACATGGGGATGTTGGGCCTTGCAGTCCTCTCACTTGGGAAATTCGAATGAACATTATTCTGGGAATGGCTAAAGGATATGTTGCTCCTGAATATGCGAGTACTGGCATGTTGAATGAGCGGAGTGATGTTTATAGTTTTGGAATTCTTATTATGGAACTAATTACAGGAAGGAATCCAGTTGATTATAGTCGGCCTCCAGAAGAGGTGAATTTAGTAGACTGGCTCAAGAAGATGGTTAGCAACAGAAATCCAGAAGGGGTGCTGGATCCCAAGCTTCCTGAGAAACCAACTTCAAGGGCACTAAAACGAGCCCTTCTTGTAGCCTTACGCTGCACTGATCCTAATGCACAAAAGCGGCCTAAAATGGGGCATGTGATACACATGCTTGAAGCTGAAGATTCCCCTTACAAAGAGGTAACAATCATTTCTGCTGAAGTTAATTCAACCTCAGTGTAG 1167 0.4799 MTEYHSSDELSNPTSIFGLRLWVVLGVCVGAAIVLILFLISVWLVLKRSKSNPVTIIPDVSKEIQEIRLDTFPDHPFPEPEPVPPSSSEEHRIQFDIGKNHRISYPERALLRSSSKSNDPPDQVPTVIPEVSHLGWGHWYTLRELEDSTNAFSPDNVIGQGGYGIVYHGILNDNSHVAIKNLLNNKGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPCSPLTWEIRMNIILGMAKGYVAPEYASTGMLNERSDVYSFGILIMELITGRNPVDYSRPPEEVNLVDWLKKMVSNRNPEGVLDPKLPEKPTSRALKRALLVALRCTDPNAQKRPKMGHVIHMLEAEDSPYKEVTIISAEVNSTSV 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1417 388 MobiDBLite consensus disorder prediction 71 91 - -
Aed11g1417 388 ProSitePatterns Protein kinases ATP-binding region signature. 158 180 IPR017441 GO:0005524
Aed11g1417 388 Gene3D Phosphorylase Kinase; domain 1 131 227 - -
Aed11g1417 388 ProSiteProfiles Protein kinase domain profile. 152 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1417 388 PANTHER RECEPTOR-LIKE KINASE PLANT 262 375 - -
Aed11g1417 388 Pfam Protein tyrosine and serine/threonine kinase 156 262 IPR001245 GO:0004672|GO:0006468
Aed11g1417 388 Pfam Protein tyrosine and serine/threonine kinase 263 366 IPR001245 GO:0004672|GO:0006468
Aed11g1417 388 Gene3D Transferase(Phosphotransferase) domain 1 261 383 - -
Aed11g1417 388 PANTHER OS01G0323000 PROTEIN 262 375 - -
Aed11g1417 388 PANTHER RECEPTOR-LIKE KINASE PLANT 5 262 - -
Aed11g1417 388 PANTHER OS01G0323000 PROTEIN 5 262 - -
Aed11g1417 388 SUPERFAMILY Protein kinase-like (PK-like) 136 369 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1417 Aed-Chr11 18770872 18772682 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1417 23 367 Trihelix Transcription Factor Family AT5G38560 32.108 2.64e-55 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Aed11g1417 PK_Tyr_Ser-Thr 6.8e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1417 - - lang:109350106 509.99