Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1414 ATGAAAAACATCAATTGGATTCGCGGAGACTCCCTCGGCAGTGGCAGTTTCGCCACCGTCAACGTTGCTATACCCACAAACGCTTCCACTCGGTTTGCCGTCAAATCCTCCGATGTTCACACCTCCTGGATGTTAAAAAATGAGAAGAAAATACTCGATTGCCTTGGAGTTGGAGTTGATTCCCCTTTCATCATCAAATGTCTCGGCAACGATACCACTGTTGAAAGCGGAGAAGAGTATTACAACGTTTTTCTCGAATACGCCGCCTGCGGTTCTCTCGCCGATCAGGTCAAAAAACACGGCGGGAGGCTCCCGGAGTCGTACGTCCGGCGATGCACGAAATCAATTGTGGAAGGTCTCAAGCATGTTCATGCAAACGGTTTTGTTCACTGCGATGTGAAGCTTCAGAACATTCTCGTTTTCGAGAATGGTGATGTTAAGATCGCGGACTTCGGGCTCGCGAAGGAGAAAGGGGGGAAGTTGGAGTGCAGGGGGACGCCGCTGTTTATGTCGCCGGAATCGGTGAACGACAATGAGTATGAATCCCCGGCGGATATATGGGCTTTGGGTTGCGCCGTGGTGGAGATGGTGACCGGAAAACCCGCGTGGGATGTTCGCGGGTCAAATATATGGTCGTTGTTGATTCGCATTGGAGTGGGAGAAGAATTGCCGAAAATTCCACAAGAGTTATCAGAAGAGGGAAAGGATTTTCTCTTGAAGTGTTTCGTTAAGGATCCTACCAAGAGATGGAGCGCTGAGATGCTTTTGAATCACCCTTTCGTTAACGGTGAAACCACTGAAACTGTTTCGTTTCAGAAAGTTAACGAGACGTTGCCGTTACCGTCTCCGTCACCGAGGACACACTTCGATTTTCCTCACTGGGCTTCCACCGTAACGGCGTCGCTTCCGAGTTCCCCGGATTCCGACGAGTGCTGTATCCGGGTATTCGAGTCATCGTGTTCGCCGGAGAATCGACTCCGGGGGCTGGTCACCGATCAGACGCCGACGAATTGGTCAGAATCGGATGGCTGGACAAGCGTTAGGTGA 1047 0.51 MKNINWIRGDSLGSGSFATVNVAIPTNASTRFAVKSSDVHTSWMLKNEKKILDCLGVGVDSPFIIKCLGNDTTVESGEEYYNVFLEYAACGSLADQVKKHGGRLPESYVRRCTKSIVEGLKHVHANGFVHCDVKLQNILVFENGDVKIADFGLAKEKGGKLECRGTPLFMSPESVNDNEYESPADIWALGCAVVEMVTGKPAWDVRGSNIWSLLIRIGVGEELPKIPQELSEEGKDFLLKCFVKDPTKRWSAEMLLNHPFVNGETTETVSFQKVNETLPLPSPSPRTHFDFPHWASTVTASLPSSPDSDECCIRVFESSCSPENRLRGLVTDQTPTNWSESDGWTSVR 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1414 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Aed11g1414 348 CDD STKc_MAPKKK 5 261 - -
Aed11g1414 348 Gene3D Transferase(Phosphotransferase) domain 1 5 293 - -
Aed11g1414 348 SMART serkin_6 6 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1414 348 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 5 302 - -
Aed11g1414 348 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524
Aed11g1414 348 ProSiteProfiles Protein kinase domain profile. 6 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1414 348 Pfam Protein kinase domain 9 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1414 348 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 5 302 - -
Aed11g1414 348 SUPERFAMILY Protein kinase-like (PK-like) 6 303 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1414 Aed-Chr11 18746699 18747745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1414 4 348 MAP Kinase Kinase Kinase AT5G67080 50.552 3.75e-116 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aed11g1414 Pkinase 2.7e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1414 - - gmx:100799550 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1414 11 18746699 18747745 Aed6g0811 6 7350159 7351211 PCT