Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed11g1389 | ATGGGTCTCTGCACTTCCAAACCCACTCATTCCTCTACTACTCACTCCCCCGCTGCACCTTCTCTAAACGACGCCGTCACACTCTCTCACAGTTCCGAGCCTCACTCCAGCTCCGCCAATGGCCAAAACCAAAACCCTAAGGAGCCCGAGAACAACGCTAAGAGATCTCCGTTTTTCCCGTTCTACAGTCCGAGTCCGGGGCGCTACGTGTTCCCGCTCTCGCCGCGGCGGTTCTTCAAGCGCCCGTTTCCGCCGCCGTCGCCGGCGAAGCACATAAGGGCGGCTCTGGCGAGGCGGCACGGCTCGATGAAGCCCAACGAGGCTGCCATACCGGAGGCGGAGGCTGTTGCCGGGCTCGACAAGAACTTCGGATTCTCCAAGCATTTCGGAAATAAATATGAACTTGGAGGTGAGATTGGGAGAGGGCATTTTGGATACACCTGTGTTGCCAAGGTGAAGAAAGGAGAGATGAAGGGACAACAAGTGGCCGTTAAAGTCATTTCGAAACTCAAGATGACCACTGCAATTGCTATCGAGGATGTGAGAAGGGAAGTTCAAATATTGAGAGCTTTGACTGCACACACGAATCTAGTACAATTCTACGATGCATATGAAGACCATGATAATGTCTTTATAGTAATGGAGTTGTGTGAAGGAGGAGAGCTGTTAGACAGAATATTATCAAGAGGTGGGAAGTACACAGAGGAAGATGCAAAAGCTGTCCTGAGACAAATACTGAATGTTGTTGCTTTTTGCCATTTACAGGGTGTTGTGCATCGTGATCTTAAACCTGAGAACTTCTTGTTTGCATCAAAGGATGAGAACTCAAAGCTGAAGGCCATAGACTTTGGGTTGTCAGATTTTGTTAAACTAGATGAAAGACTTAATGATATTGTTGGCAGTGCATACTACGTGGCTCCCGAAGTTCTACATAGAGCTTACAGTACAGAGGCTGATGTCTGGAGTATTGGAGTGATTGCATATATTTTATTATGTGGCAGCCGTCCTTTTTGGGCCCGGACTGAATCTGGTATCTTTCGTGCTGTATTGAAAGCTGATCCAGGTTTTGATGAACCTCCTTGGCCTTCTCTGTCAGATGAGGCAACTAATTTTGTTAAGCGATTACTAAATAAAGATCCACGGAAAAGAATGTCTGCAGCACAGGCATTAAGTCATCCATGGATTAGAAACAAGGATGTAAAAGTACCTCTGGATATTCTAATATTCAAGCTCATGAAGGCATATATGCGTTCCTCATCTCTACGAAAAGCAGCTTTAAGGGCTCTGTCTAAGACGTTAACTGTTGATGAGCTATTTTATTTGAGGGAGCAGTTTGCACTTTTAGAGCCAAGCAAAAATGGCACTATTAGCGTGGAAAATATCAAAGCGGTCTTGATGGTAAAGACAACAGATGCTATGAAGGAGTCACGCATACCTGACTTTTTAGCATCACTTAATGCATTACAATATAGAAGGATGGATTTTGACGAGTTCTGTGCAGCTGCACTTAGTGTTCATCAACTTGAAGCACTTGACCAGTGGGAACAAAATGCACATTGTGCCTATGACCTTTTTGAAAAGGATGGAAACAAGGCCATAGTCATTGACGAACTAGCTTCGGAGCTTGGGCTTGGTCCTTCTGTCCCTGTTCATGCTGTTTTGCACGATTGGATTCGGCACACTGATGGAAAATTAAGTTTCCTTGGATTTGTCAAACTGTTGCATGGCCCATCTAGAAGTCTTGCAAAAGCTCAATAG | 1758 | 0.4551 | MGLCTSKPTHSSTTHSPAAPSLNDAVTLSHSSEPHSSSANGQNQNPKEPENNAKRSPFFPFYSPSPGRYVFPLSPRRFFKRPFPPPSPAKHIRAALARRHGSMKPNEAAIPEAEAVAGLDKNFGFSKHFGNKYELGGEIGRGHFGYTCVAKVKKGEMKGQQVAVKVISKLKMTTAIAIEDVRREVQILRALTAHTNLVQFYDAYEDHDNVFIVMELCEGGELLDRILSRGGKYTEEDAKAVLRQILNVVAFCHLQGVVHRDLKPENFLFASKDENSKLKAIDFGLSDFVKLDERLNDIVGSAYYVAPEVLHRAYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPGFDEPPWPSLSDEATNFVKRLLNKDPRKRMSAAQALSHPWIRNKDVKVPLDILIFKLMKAYMRSSSLRKAALRALSKTLTVDELFYLREQFALLEPSKNGTISVENIKAVLMVKTTDAMKESRIPDFLASLNALQYRRMDFDEFCAAALSVHQLEALDQWEQNAHCAYDLFEKDGNKAIVIDELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLAKAQ | 585 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed11g1389 | 585 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 40 | 580 | - | - | |
Aed11g1389 | 585 | CDD | STKc_CAMK | 132 | 394 | - | - | |
Aed11g1389 | 585 | Gene3D | Transferase(Phosphotransferase) domain 1 | 222 | 413 | - | - | |
Aed11g1389 | 585 | ProSiteProfiles | Protein kinase domain profile. | 133 | 395 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed11g1389 | 585 | Gene3D | - | 414 | 503 | - | - | |
Aed11g1389 | 585 | Gene3D | Phosphorylase Kinase; domain 1 | 126 | 221 | - | - | |
Aed11g1389 | 585 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 257 | 269 | IPR008271 | GO:0004672|GO:0006468 | |
Aed11g1389 | 585 | Gene3D | - | 419 | 573 | - | - | |
Aed11g1389 | 585 | MobiDBLite | consensus disorder prediction | 1 | 58 | - | - | |
Aed11g1389 | 585 | PANTHER | CALMODULIN-DOMAIN KINASE CDPK PROTEIN | 40 | 580 | - | - | |
Aed11g1389 | 585 | SUPERFAMILY | Protein kinase-like (PK-like) | 130 | 425 | IPR011009 | - | |
Aed11g1389 | 585 | MobiDBLite | consensus disorder prediction | 1 | 51 | - | - | |
Aed11g1389 | 585 | Pfam | Protein kinase domain | 133 | 395 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed11g1389 | 585 | SMART | serkin_6 | 133 | 395 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed11g1389 | 585 | SUPERFAMILY | EF-hand | 422 | 576 | IPR011992 | - | |
Aed11g1389 | 585 | ProSitePatterns | Protein kinases ATP-binding region signature. | 139 | 165 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed11g1389 | Aed-Chr11 | 18527402 | 18537456 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed11g1389 | 1 | 585 | EF-hand Containing Proteins | AT3G50530 | 72.441 | 0.0 | 921 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Aed11g1389 | Pkinase | 5.4e-70 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed11g1389 | K00924 | - | gmx:100794177 | 1060.44 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aed6g0845 | 6 | 8123730 | 8128919 | Aed11g1389 | 11 | 18527402 | 18537456 | PCT |