LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed11g1388	ATGGAGTTTACCTCTAATAATATGCTTCCTTTTGTTTCAATGTTTTGGCTTGTGTTCCTTAGTCCCCTAGTGAACTGTCAACTTAAATATAACTTCTATGACTCAACTTGTCCAAACCTGACCGGAATTGTTCGATACAACGTGCGGTTAGCTATGGCTAATGATGCAAGGATTGCTGCTTCTCTCTTGCGCCTTCATTTCCATGATTGTTTCGTCAATGGATGTGATGCCTCAGTGCTACTTGATGACACGGACACTTTAAAGGGTGAGAAAAATGCACTGCCTAATAAAAATTCACTGAGAGGATTTGATGTGATTGACACAATCAAAGCTGCATTGGAGAAGGCTTGTCCCTCCACTGTCTCATGTGCTGATATACTTACTCTAGCGGCAAGAGAAGCTGTTTCTTTTAGCAGAGGTCCATTTTGGTACGTGCCTCTGGGTCGAAGAGATGGTACAACAGCAAGTGAGAGCGAGGCAAATAACTTGCCATCACCCTTTGAGCCTCTAGAAAACATTACCAACAAGTTTATATCAAAGGGTCTTGAAAAGAAGGATGTGGCAGTACTCTCAGGTGCACACACTCTTGGGTTTGCTCAATGCTTCACGTTCAAGCCAAGGCTCTTTGACTTTGGTGGCTCTGGTAAATCTGATCCAGCACTTGAGGCTTCACTTCTAACAAATTTAGTGAAACTGTGTCCAAATCAAGATGACTCAGACACCAACTTGGCTCCCTTGGATCCTGTCACTACCAACACATTTGATAACATGTATTACAAAAACATAGTGAACAATTCGGGGTTGCTTCAGTCAGACCAGGCTCTTTTGAGTGACAACACAACTGCTTCACTGGTCAACGCATATAGCAAGTGGCCTTCTATGTTCTTCAGAGACTTTGGGATATCTATGGAGAAAATGGGACGCATGGGTGTACTCACAGGATCACAGGGCCAAATTAGGACTAACTGTAGGGCTGTCAACTAG	984	0.4329	MEFTSNNMLPFVSMFWLVFLSPLVNCQLKYNFYDSTCPNLTGIVRYNVRLAMANDARIAASLLRLHFHDCFVNGCDASVLLDDTDTLKGEKNALPNKNSLRGFDVIDTIKAALEKACPSTVSCADILTLAAREAVSFSRGPFWYVPLGRRDGTTASESEANNLPSPFEPLENITNKFISKGLEKKDVAVLSGAHTLGFAQCFTFKPRLFDFGGSGKSDPALEASLLTNLVKLCPNQDDSDTNLAPLDPVTTNTFDNMYYKNIVNNSGLLQSDQALLSDNTTASLVNAYSKWPSMFFRDFGISMEKMGRMGVLTGSQGQIRTNCRAVN	327

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed11g1388	327	Gene3D	Peroxidase, domain 2	164	306	-	-
	Aed11g1388	327	ProSiteProfiles	Plant heme peroxidase family profile.	27	327	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Aed11g1388	327	Gene3D	-	31	327	-	-
	Aed11g1388	327	CDD	secretory_peroxidase	27	326	IPR033905	GO:0004601\|GO:0042744
	Aed11g1388	327	PANTHER	PEROXIDASE	12	326	-	-
	Aed11g1388	327	Pfam	Peroxidase	45	289	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Aed11g1388	327	SUPERFAMILY	Heme-dependent peroxidases	27	327	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Aed11g1388	327	ProSitePatterns	Peroxidases active site signature.	59	70	IPR019794	GO:0004601
	Aed11g1388	327	PRINTS	Haem peroxidase superfamily signature	186	201	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Aed11g1388	327	PRINTS	Haem peroxidase superfamily signature	59	73	IPR002016	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed11g1388	Aed-Chr11	18522836	18524079	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed11g1388	28	323	Peroxidase	AT1G49570	62.542	2.20e-132	379

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed11g1388	K00430		-	gmx:100815708	610.912

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