Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1387 ATGCGTTGGTTCCCCACCCTCGTTTTCTCCCATTCTAGTTGTAATTCATCAACATCAACATCGTCTGAAGATCCAGGGAGTCTAAGGTCTTGTTCCCCTTCGACATCGTCCTGGAGGAAGAACAGCCGGACGTCGGCGTGGTTCTTCGGGAGCGGGAAAAGGTCGACGAGGTCGAGGAAGCTGAGCCACATCCCTGACTTAGACACCCTGGTGGTCCCCCCCTTGTGTCGCTCAAGCAGCAGCTGCGTCCAGCCTCAGCCCTTGCCCTTGCCCCGAGACGCAGATTACCGTTTTCCCTCCCCCAAAGATGCCACCGCTCCCCTCGATGTTACCCTCACCCCTGGTTTCCGAATGCGCAGTGTATTTGCGAGCCAGGAGACAAAGCCTGTGGTGGCTCATGCTCAACAACAAGATAGCAGGAGCGGTGGTGCAAGCACAAATAATCGCTGGTTGGGCGTCCCTGCTAGAAGTGCTCCAACAAGTCCCTTCGCGAGTCCCAGAATAAACGATGATTTCATACCATACTATTTTGTCTCATCTAAAGGAATGAACCAGTTCTGGTCCGCACCGGAGATGCCCACATTCGACGCTTCATCTCCTGCTTTCACTGATAACAACACTACCCTTTCTCCCCACCAAAGCCCACGCGGTAAAAGCCCAACTGGCCCTTCATCCATACCCCCCAGGTTATCCATTGACACCGCAATAGCACGTCGTGAAACCACTGCTCCCATCACCGTCCACCCCCTACCCTTGCCTCCTTGGGCTGGCCCTGGGGCCCCCTTACTTTCACCATCTTCTGCGTTTTCCCCACCCGTCGCGTCTAAGATTGCAGAATCCTTGCCCATGAAAAACCAGTGGCAAAAAGGAAAACTTCTTGGCCGAGGTACTTTTGGAACTGTTTATGCTGCCACCAATAGGAAAACTGGAGCATTGTGTGCAATGAAGGAAGCAGAGATCTTTGCTGATGATCCTAAGTCTGCAGAGTGCATCAAGCAGTTAGAGCAGGAAATTAAATTTCTTAGCCATCTCAAACATCCAAACATTGTGCAGTATTATGGTAGTGAAATAGTAGAAAACAGGTTTTATATTTATCTGGAATATGTCCATCCCGGTTCAATGAATAAATACGTTCGTGACCATTGTGGTGCAATAACAGAATGCATTGTTAGGAGTTTCACGCGCCATATTCTTTCGGGGCTGGCTTACTTGCATAGCAAAAAAACAATTCACAGGGACATCAAAGGAGCTAACTTGCTTGTTGATTCTGCTGGTGTTGTTAAGCTTGCTGACTTTGGGATGGCCAAGCATCTAACTGGACATGCTGCAGATCTTTCTTTGAAGGGAAGTCCATATTGGATGGCTCCAGAGCTCTTGCAAGAAGTTGTGCAAAAAGATAACAACTCCGACGTAGCTTTGGCTGTTGATATTTGGAGTTTGGGCTGCACAATAATTGAAATGTTTACGGGGAAGCCTCCTTGGAGTGAATACGAAGGAGCCGCAGCTATGTTTAAGGTTATGAAGGATACCCCTCCTATACCAGAAACATTGTCAGCGGAGGGTAAAGATTTCCTGAGACTTTGCTTTATAAGAAATCCAGCAGAGAGACCAACTGCTTCAATGTTACTAGAACATCGATTTCTGAAAAACTTGCAACAGCCAGATGTTTCATCTTCCATGCAGCTCTATAATTTTGGAACAACCTTCACGATGGATATCAATAGTCCCAGAGAGTTGTCTGAAAATAAACTTGATCAGATTTCTTTTCCTAAAGGAAAATTAGTCGCTGAGAGTGCCCAACTTTACTTGTCATATTCCTATAGTGTCACTGCCAGAGAGAAGGTGAATGAGCGAGCCATGGAACCTCCTTCATCACAATCCATTGAAATTTCTGGCACCGAATACCAAGCTGGGGATGATACACAAGACAAGGTCATCAATGAATGTTGTTCTTGCTTCTATGACTGTACACAGGATCTCTTCGATTTCTTGTGCTGTAACTTTTGTTAG 2010 0.4711 MRWFPTLVFSHSSCNSSTSTSSEDPGSLRSCSPSTSSWRKNSRTSAWFFGSGKRSTRSRKLSHIPDLDTLVVPPLCRSSSSCVQPQPLPLPRDADYRFPSPKDATAPLDVTLTPGFRMRSVFASQETKPVVAHAQQQDSRSGGASTNNRWLGVPARSAPTSPFASPRINDDFIPYYFVSSKGMNQFWSAPEMPTFDASSPAFTDNNTTLSPHQSPRGKSPTGPSSIPPRLSIDTAIARRETTAPITVHPLPLPPWAGPGAPLLSPSSAFSPPVASKIAESLPMKNQWQKGKLLGRGTFGTVYAATNRKTGALCAMKEAEIFADDPKSAECIKQLEQEIKFLSHLKHPNIVQYYGSEIVENRFYIYLEYVHPGSMNKYVRDHCGAITECIVRSFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLTGHAADLSLKGSPYWMAPELLQEVVQKDNNSDVALAVDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMKDTPPIPETLSAEGKDFLRLCFIRNPAERPTASMLLEHRFLKNLQQPDVSSSMQLYNFGTTFTMDINSPRELSENKLDQISFPKGKLVAESAQLYLSYSYSVTAREKVNERAMEPPSSQSIEISGTEYQAGDDTQDKVINECCSCFYDCTQDLFDFLCCNFC 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1387 669 Gene3D Transferase(Phosphotransferase) domain 1 283 578 - -
Aed11g1387 669 SMART serkin_6 287 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1387 669 MobiDBLite consensus disorder prediction 1 40 - -
Aed11g1387 669 Pfam Protein kinase domain 288 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1387 669 MobiDBLite consensus disorder prediction 198 228 - -
Aed11g1387 669 ProSitePatterns Protein kinases ATP-binding region signature. 293 316 IPR017441 GO:0005524
Aed11g1387 669 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 597 - -
Aed11g1387 669 MobiDBLite consensus disorder prediction 8 40 - -
Aed11g1387 669 MobiDBLite consensus disorder prediction 129 154 - -
Aed11g1387 669 SUPERFAMILY Protein kinase-like (PK-like) 278 572 IPR011009 -
Aed11g1387 669 ProSiteProfiles Protein kinase domain profile. 287 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1387 669 MobiDBLite consensus disorder prediction 197 229 - -
Aed11g1387 669 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 597 - -
Aed11g1387 669 MobiDBLite consensus disorder prediction 127 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1387 Aed-Chr11 18515449 18520250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1387 147 608 MAP Kinase Kinase Kinase AT5G66850 58.431 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aed11g1387 Pkinase 1.1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1387 - - gmx:100793654 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1387 11 18515449 18520250 Aed6g0852 6 8297782 8303114 PCT